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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183625358
OOGF01016699
165001
Bacteroidota
GTT
Asn
>WENV183625534
OOGF01055427
309582
Bacteroidota
TTT
Lys
>WENV183625145
OOGF01001477
127458
Bacteroidota
GAC
Val
>WENV183625341
OOGF01013982
241347
Bacteroidota
TTG
Gln
>WENV183625223
OOGF01004979
273242
Bacteroidota
CCA
Trp
>WENV183625232
OOGF01006200
45519
Bacteroidota
GGA
Ser
>WENV183625398
OOGF01023274
127288
Bacteroidota
TGG
Pro
>WENV183625323
OOGF01012067
238764
Bacteroidota
>WENV183625196
OOGF01003547
238764
Bacteroidota
>WENV183625241
OOGF01006528
341598
Bacteroidota
GCC
Gly
>WENV183625208
OOGF01004324
44938
Bacteroidota
TGA
Ser
>WENV183625392
OOGF01022199
235935
Bacteroidota
TCC
Gly
>WENV183625116
OOGF01000809
235935
Bacteroidota
TCC
Gly
>WENV183625188
OOGF01003115
235802
Bacteroidota
CAT
Met
>WENV183625483
OOGF01041196
309421
Bacteroidota
TCC
Gly
>WENV183625482
OOGF01041196
309421
Bacteroidota
TCC
Gly
>WENV183625481
OOGF01041196
309421
Bacteroidota
TCC
Gly
>WENV183625242
OOGF01006528
58832
Bacteroidota
TAA
Leu
>WENV183625178
OOGF01002831
176463
Bacteroidota
TCT
Arg
>WENV183625213
OOGF01004403
145555
Bacteroidota
GTC
Asp
>WENV183625416
OOGF01026142
49675
Bacteroidota
TGA
Ser
>WENV183625300
OOGF01010299
103368
Bacteroidota
CAA
Leu
>WENV183625336
OOGF01013313
193473
Bacteroidota
GTC
Asp
>WENV183625115
OOGF01000809
101289
Bacteroidota
GTA
Tyr
>WENV183625497
OOGF01045379
152405
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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