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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183626912
OOGK01009389
236929
Bacteroidota
TTT
Lys
>WENV183627006
OOGK01021115
267954
Bacteroidota
GCC
Gly
>WENV183626884
OOGK01006770
238765
Bacteroidota
GCC
Gly
>WENV183626803
OOGK01000884
126691
Bacteroidota
TGG
Pro
>WENV183627066
OOGK01031201
309582
Bacteroidota
TTT
Lys
>WENV183627256
OOGK01078289
172532
Bacteroidota
GTC
Asp
>WENV183627149
OOGK01047377
338625
Bacteroidota
TTC
Glu
>WENV183627080
OOGK01033997
161616
Bacteroidota
CAT
Met
>WENV183627260
OOGK01078756
127414
Bacteroidota
TGG
Pro
>WENV183626795
OOGK01000353
197066
Bacteroidota
GTT
Asn
>WENV183626943
OOGK01013563
190649
Bacteroidota
GTT
Asn
>WENV183626997
OOGK01020395
290994
Bacteroidota
CAT
Met
>WENV183627007
OOGK01021177
159518
Bacteroidota
GAT
Ile
>WENV183626857
OOGK01004849
341187
Bacteroidota
TTG
Gln
>WENV183627277
OOGK01082833
309421
Bacteroidota
TCC
Gly
>WENV183626815
OOGK01001626
145408
Bacteroidota
TCT
Arg
>WENV183627023
OOGK01024080
145557
Bacteroidota
CAT
Met
>WENV183626881
OOGK01006510
16286
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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