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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183647131
OQVR01067071
80614
Bacteroidota
>WENV183646118
OQVR01000078
95987
Bacteroidota
CAA
Leu
>WENV183646281
OQVR01000934
95987
Bacteroidota
CAA
Leu
>WENV183646764
OQVR01013848
95987
Bacteroidota
CAA
Leu
>WENV183646765
OQVR01014125
95987
Bacteroidota
CAA
Leu
>WENV183646466
OQVR01003333
144695
Bacteroidota
CAT
Met
>WENV183646640
OQVR01008704
193809
Bacteroidota
CAT
Met
>WENV183646785
OQVR01015108
237797
Bacteroidota
CCA
Trp
>WENV183646169
OQVR01000280
412236
Bacteroidota
CCC
Gly
>WENV183646208
OQVR01000416
237796
Bacteroidota
CGT
Thr
>WENV183646276
OQVR01000911
344769
Bacteroidota
CTC
Glu
>WENV183646549
OQVR01005495
413663
Bacteroidota
CTG
Gln
>WENV183646532
OQVR01005022
251266
Bacteroidota
CTT
Lys
>WENV183646365
OQVR01001812
313363
Bacteroidota
GAA
Phe
>WENV183646536
OQVR01005089
313363
Bacteroidota
GAA
Phe
>WENV183646490
OQVR01003995
313363
Bacteroidota
GAA
Phe
>WENV183646368
OQVR01001815
313363
Bacteroidota
GAA
Phe
>WENV183646172
OQVR01000290
313363
Bacteroidota
GAA
Phe
>WENV183646123
OQVR01000097
313363
Bacteroidota
GAA
Phe
>WENV183646105
OQVR01000051
267954
Bacteroidota
GCC
Gly
>WENV183646356
OQVR01001764
267954
Bacteroidota
GCC
Gly
>WENV183646807
OQVR01016638
143169
Bacteroidota
GGG
Pro
>WENV183647086
OQVR01055443
127023
Bacteroidota
GGG
Pro
>WENV183646800
OQVR01016037
95986
Bacteroidota
GTA
Tyr
>WENV183647141
OQVR01071458
179643
Bacteroidota
GTC
Asp
>WENV183646734
OQVR01012675
196394
Bacteroidota
GTC
Asp
>WENV183646258
OQVR01000754
196394
Bacteroidota
GTC
Asp
>WENV183646733
OQVR01012675
146764
Bacteroidota
GTC
Asp
>WENV183646554
OQVR01005757
147147
Bacteroidota
GTG
His
>WENV183646545
OQVR01005389
147147
Bacteroidota
GTG
His
>WENV183646297
OQVR01001138
147147
Bacteroidota
GTG
His
>WENV183646277
OQVR01000911
147147
Bacteroidota
GTG
His
>WENV183646162
OQVR01000249
147147
Bacteroidota
GTG
His
>WENV183646227
OQVR01000533
37076
Bacteroidota
TAA
Leu
>WENV183646223
OQVR01000486
141635
Bacteroidota
TAC
Val
>WENV183646360
OQVR01001781
141635
Bacteroidota
TAC
Val
>WENV183646479
OQVR01003687
141635
Bacteroidota
TAC
Val
>WENV183646196
OQVR01000358
136244
Bacteroidota
TAC
Val
>WENV183646551
OQVR01005715
96124
Bacteroidota
TAG
Leu
>WENV183646186
OQVR01000356
145504
Bacteroidota
TGT
Thr
>WENV183646802
OQVR01016272
412479
Bacteroidota
TTG
Gln
>WENV183646597
OQVR01006968
415558
Bacteroidota
TTG
Gln
>WENV183646533
OQVR01005033
415558
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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