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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183649980
OQVT01008285
235097
Bacteroidota
TTT
Lys
>WENV183649573
OQVT01002678
95987
Bacteroidota
CAA
Leu
>WENV183649846
OQVT01006153
95987
Bacteroidota
CAA
Leu
>WENV183650470
OQVT01023869
95987
Bacteroidota
CAA
Leu
>WENV183651050
OQVT01067007
95987
Bacteroidota
CAA
Leu
>WENV183650614
OQVT01031386
339412
Bacteroidota
GGT
Thr
>WENV183649913
OQVT01007102
267954
Bacteroidota
GCC
Gly
>WENV183649914
OQVT01007102
267954
Bacteroidota
GCC
Gly
>WENV183650887
OQVT01048584
267954
Bacteroidota
GCC
Gly
>WENV183649363
OQVT01000772
237796
Bacteroidota
CGT
Thr
>WENV183649496
OQVT01001803
237796
Bacteroidota
CGT
Thr
>WENV183650883
OQVT01048147
237796
Bacteroidota
CGT
Thr
>WENV183649285
OQVT01000393
413663
Bacteroidota
CTG
Gln
>WENV183649685
OQVT01003908
413663
Bacteroidota
CTG
Gln
>WENV183650558
OQVT01027906
415410
Bacteroidota
TTG
Gln
>WENV183649720
OQVT01004371
412479
Bacteroidota
TTG
Gln
>WENV183650409
OQVT01020954
147147
Bacteroidota
GTG
His
>WENV183650094
OQVT01010959
147147
Bacteroidota
GTG
His
>WENV183649829
OQVT01005963
147147
Bacteroidota
GTG
His
>WENV183650084
OQVT01010845
155123
Bacteroidota
GTT
Asn
>WENV183649817
OQVT01005691
155123
Bacteroidota
GTT
Asn
>WENV183649728
OQVT01004466
155123
Bacteroidota
GTT
Asn
>WENV183649266
OQVT01000282
155123
Bacteroidota
GTT
Asn
>WENV183650799
OQVT01041801
145504
Bacteroidota
TGT
Thr
>WENV183649727
OQVT01004434
338132
Bacteroidota
GCA
Cys
>WENV183649776
OQVT01005258
193809
Bacteroidota
CAT
Met
>WENV183649206
OQVT01000059
37076
Bacteroidota
TAA
Leu
>WENV183650945
OQVT01053014
37076
Bacteroidota
TAA
Leu
>WENV183650269
OQVT01016008
37076
Bacteroidota
TAA
Leu
>WENV183650046
OQVT01009840
37076
Bacteroidota
TAA
Leu
>WENV183649940
OQVT01007604
37076
Bacteroidota
TAA
Leu
>WENV183649934
OQVT01007442
37076
Bacteroidota
TAA
Leu
>WENV183649492
OQVT01001740
37076
Bacteroidota
TAA
Leu
>WENV183650314
OQVT01017213
251266
Bacteroidota
CTT
Lys
>WENV183649678
OQVT01003722
235207
Bacteroidota
CAT
Met
>WENV183649423
OQVT01001326
412235
Bacteroidota
>WENV183649507
OQVT01001933
147148
Bacteroidota
CAT
Met
>WENV183649692
OQVT01003993
52358
Bacteroidota
TGA
Ser
>WENV183649616
OQVT01003169
415558
Bacteroidota
TTG
Gln
>WENV183649592
OQVT01002968
415558
Bacteroidota
TTG
Gln
>WENV183650341
OQVT01018252
175704
Bacteroidota
TGC
Ala
>WENV183649661
OQVT01003577
419272
Bacteroidota
CTG
Gln
>WENV183650501
OQVT01025083
95875
Bacteroidota
TAG
Leu
>WENV183650067
OQVT01010359
280469
Bacteroidota
CGT
Thr
>WENV183649253
OQVT01000209
167013
Bacteroidota
TGG
Pro
>WENV183649535
OQVT01002309
44852
Bacteroidota
TAA
Leu
>WENV183649688
OQVT01003939
147439
Bacteroidota
TCT
Arg
>WENV183649196
OQVT01000040
238606
Bacteroidota
CGG
Pro
>WENV183649765
OQVT01005092
150485
Bacteroidota
GTT
Asn
>WENV183650639
OQVT01032537
95986
Bacteroidota
GTA
Tyr
>WENV183649317
OQVT01000640
196394
Bacteroidota
GTC
Asp
>WENV183649538
OQVT01002323
132360
Bacteroidota
GGG
Pro
>WENV183649506
OQVT01001917
132360
Bacteroidota
GGG
Pro
>WENV183650814
OQVT01042644
412236
Bacteroidota
CCC
Gly
>WENV183649529
OQVT01002266
146764
Bacteroidota
GTC
Asp
>WENV183649190
OQVT01000024
127023
Bacteroidota
GGG
Pro
>WENV183651031
OQVT01065121
235129
Bacteroidota
GCC
Gly
>WENV183651346
OQVT01133104
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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