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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183725907
PJQF01035308
191838
Bacteroidota
CAT
Met
>WENV183725836
PJQF01022703
281460
Bacteroidota
CAT
Met
>WENV183725667
PJQF01005950
287318
Bacteroidota
GAA
Phe
>WENV183726233
PJQF01129720
284315
Bacteroidota
GAA
Phe
>WENV183726289
PJQF01149374
29854
Bacteroidota
GCT
Ser
>WENV183725481
PJQF01000137
176431
Bacteroidota
GGC
Ala
>WENV183725682
PJQF01007560
187426
Bacteroidota
GGC
Ala
>WENV183725770
PJQF01014636
175908
Bacteroidota
GTC
Asp
>WENV183725649
PJQF01004874
182483
Bacteroidota
GTG
His
>WENV183725837
PJQF01022841
179905
Bacteroidota
GTT
Asn
>WENV183725868
PJQF01028531
155765
Bacteroidota
TAC
Val
>WENV183726174
PJQF01102423
56363
Bacteroidota
TGA
Ser
>WENV183725620
PJQF01003806
185890
Bacteroidota
TGC
Ala
>WENV183725737
PJQF01011473
156756
Bacteroidota
TGG
Pro
>WENV183725671
PJQF01006516
284499
Bacteroidota
TGT
Thr
>WENV183725732
PJQF01011159
404059
Bacteroidota
TTC
Glu
>WENV183725748
PJQF01012541
285588
Bacteroidota
TTT
Lys
>WENV183725749
PJQF01012541
285588
Bacteroidota
TTT
Lys
>WENV183726236
PJQF01132241
179729
Bacteroidota
TTT
Lys
>WENV183726432
PJQF01197175
284068
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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