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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170011516
APMI01071402
178213
Betaproteobacteria
TCT
Arg
>WENV170011731
APMI01086385
178213
Betaproteobacteria
TCT
Arg
>WENV170010154
APMI01009839
284938
Betaproteobacteria
TTT
Lys
>WENV170010520
APMI01019314
284938
Betaproteobacteria
TTT
Lys
>WENV170010609
APMI01022452
284938
Betaproteobacteria
TTT
Lys
>WENV170009856
APMI01003989
409613
Betaproteobacteria
CCT
Arg
>WENV170012377
APMI01164575
409613
Betaproteobacteria
CCT
Arg
>WENV170011863
APMI01097525
285353
Betaproteobacteria
GCC
Gly
>WENV170009336
APMI01000098
188716
Betaproteobacteria
ACG
Arg
>WENV170010407
APMI01016219
188716
Betaproteobacteria
ACG
Arg
>WENV170010748
APMI01027446
188716
Betaproteobacteria
ACG
Arg
>WENV170009332
APMI01000098
283937
Betaproteobacteria
GCC
Gly
>WENV170009334
APMI01000098
283937
Betaproteobacteria
GCC
Gly
>WENV170010838
APMI01030984
29649
Betaproteobacteria
CGA
Ser
>WENV170011593
APMI01076121
284821
Betaproteobacteria
TTT
Lys
>WENV170011637
APMI01078808
282797
Betaproteobacteria
CTT
Lys
>WENV170010739
APMI01027024
293769
Betaproteobacteria
GCC
Gly
>WENV170010917
APMI01035089
293769
Betaproteobacteria
GCC
Gly
>WENV170010919
APMI01035089
293769
Betaproteobacteria
GCC
Gly
>WENV170012279
APMI01145673
293769
Betaproteobacteria
GCC
Gly
>WENV170010990
APMI01038080
57723
Betaproteobacteria
TGA
Ser
>WENV170009901
APMI01004658
283003
Betaproteobacteria
CCG
Arg
>WENV170010971
APMI01037042
283003
Betaproteobacteria
CCG
Arg
>WENV170011066
APMI01041780
283003
Betaproteobacteria
CCG
Arg
>WENV170009702
APMI01001999
121190
Betaproteobacteria
CAA
Leu
>WENV170010072
APMI01007752
121190
Betaproteobacteria
CAA
Leu
>WENV170011839
APMI01095670
121190
Betaproteobacteria
CAA
Leu
>WENV170010156
APMI01009859
281431
Betaproteobacteria
GTT
Asn
>WENV170010774
APMI01028520
283006
Betaproteobacteria
GCC
Gly
>WENV170010777
APMI01028520
283006
Betaproteobacteria
GCC
Gly
>WENV170011500
APMI01069992
283006
Betaproteobacteria
GCC
Gly
>WENV170009540
APMI01000621
31619
Betaproteobacteria
CGA
Ser
>WENV170010132
APMI01009418
31619
Betaproteobacteria
CGA
Ser
>WENV170010594
APMI01021806
31619
Betaproteobacteria
CGA
Ser
>WENV170010702
APMI01025708
31619
Betaproteobacteria
CGA
Ser
>WENV170011736
APMI01086681
73401
Betaproteobacteria
TAG
Leu
>WENV170010197
APMI01010694
192191
Betaproteobacteria
CAT
Met
>WENV170011154
APMI01046260
483989
Betaproteobacteria
>WENV170010336
APMI01014219
184548
Betaproteobacteria
>WENV170009704
APMI01002018
121191
Betaproteobacteria
CAG
Leu
>WENV170009705
APMI01002018
121191
Betaproteobacteria
CAG
Leu
>WENV170009706
APMI01002018
121191
Betaproteobacteria
CAG
Leu
>WENV170009493
APMI01000420
282700
Betaproteobacteria
CTT
Lys
>WENV170010775
APMI01028520
481266
Betaproteobacteria
GCA
Cys
>WENV170011501
APMI01069992
481266
Betaproteobacteria
GCA
Cys
>WENV170010391
APMI01015611
56360
Betaproteobacteria
CGA
Ser
>WENV170011882
APMI01099014
56360
Betaproteobacteria
CGA
Ser
>WENV170011951
APMI01106024
56360
Betaproteobacteria
CGA
Ser
>WENV170012251
APMI01142758
56360
Betaproteobacteria
CGA
Ser
>WENV170009496
APMI01000423
178981
Betaproteobacteria
CAT
Met
>WENV170009982
APMI01006374
178981
Betaproteobacteria
CAT
Met
>WENV170010897
APMI01034007
178981
Betaproteobacteria
CAT
Met
>WENV170011237
APMI01051627
178981
Betaproteobacteria
CAT
Met
>WENV170012135
APMI01124599
120253
Betaproteobacteria
CAG
Leu
>WENV170009713
APMI01002092
120253
Betaproteobacteria
CAG
Leu
>WENV170011469
APMI01067630
120253
Betaproteobacteria
CAG
Leu
>WENV170012405
APMI01169571
284936
Betaproteobacteria
CGT
Thr
>WENV170010899
APMI01034158
180485
Betaproteobacteria
CAT
Met
>WENV170011749
APMI01087590
180485
Betaproteobacteria
CAT
Met
>WENV170009517
APMI01000545
184269
Betaproteobacteria
TTG
Gln
>WENV170009600
APMI01000827
184269
Betaproteobacteria
TTG
Gln
>WENV170011837
APMI01094992
184269
Betaproteobacteria
TTG
Gln
>WENV170010639
APMI01023364
178096
Betaproteobacteria
TCT
Arg
>WENV170009293
APMI01000040
282704
Betaproteobacteria
CGC
Ala
>WENV170009337
APMI01000099
289755
Betaproteobacteria
TAC
Val
>WENV170010144
APMI01009568
409406
Betaproteobacteria
GGT
Thr
>WENV170011363
APMI01060938
5917
Betaproteobacteria
GCT
Ser
>WENV170011840
APMI01095826
20603
Betaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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