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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183721846
PDWJ01090783
113955
Fusobacteriota
>WENV183721056
PDWJ01053621
152483
Fusobacteriota
GTC
Asp
>WENV183720438
PDWJ01034420
48052
Fusobacteriota
TAA
Leu
>WENV183721055
PDWJ01053621
243607
Fusobacteriota
TAC
Val
>WENV183722116
PDWJ01106644
248480
Fusobacteriota
TAC
Val
>WENV183721848
PDWJ01090783
248480
Fusobacteriota
TAC
Val
>WENV183720712
PDWJ01042603
248480
Fusobacteriota
TAC
Val
>WENV183720187
PDWJ01028691
115931
Fusobacteriota
TAG
Leu
>WENV183721329
PDWJ01064758
151855
Fusobacteriota
TGC
Ala
>WENV183722581
PDWJ01140417
151855
Fusobacteriota
TGC
Ala
>WENV183720629
PDWJ01040070
242889
Fusobacteriota
TGT
Thr
>WENV183721057
PDWJ01053621
255856
Fusobacteriota
TGT
Thr
>WENV183720185
PDWJ01028681
255856
Fusobacteriota
TGT
Thr
>WENV183720188
PDWJ01028691
390517
Fusobacteriota
TTG
Gln
>WENV183720186
PDWJ01028691
248546
Fusobacteriota
TTT
Lys
>WENV183720441
PDWJ01034420
246346
Fusobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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