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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183622954
OOFW01061399
191831
Gammaproteobacteria
ACG
Arg
>WENV183622953
OOFW01061399
148442
Gammaproteobacteria
ACG
Arg
>WENV183622726
OOFW01003437
148442
Gammaproteobacteria
ACG
Arg
>WENV183622602
OOFW01000022
148442
Gammaproteobacteria
ACG
Arg
>WENV183622601
OOFW01000022
148442
Gammaproteobacteria
ACG
Arg
>WENV183622609
OOFW01000084
190137
Gammaproteobacteria
CAT
Met
>WENV183622712
OOFW01002284
190137
Gammaproteobacteria
CAT
Met
>WENV183622948
OOFW01059733
149065
Gammaproteobacteria
CCA
Trp
>WENV183622647
OOFW01000742
166654
Gammaproteobacteria
GAC
Val
>WENV183622667
OOFW01001007
166654
Gammaproteobacteria
GAC
Val
>WENV183622848
OOFW01024313
412799
Gammaproteobacteria
GCA
Cys
>WENV183622681
OOFW01001417
412799
Gammaproteobacteria
GCA
Cys
>WENV183622940
OOFW01057774
10780
Gammaproteobacteria
GCT
Ser
>WENV183622692
OOFW01002007
8480
Gammaproteobacteria
GCT
Ser
>WENV183622846
OOFW01023691
146644
Gammaproteobacteria
GGG
Pro
>WENV183622641
OOFW01000618
147053
Gammaproteobacteria
GTT
Asn
>WENV183622642
OOFW01000618
147053
Gammaproteobacteria
GTT
Asn
>WENV183622614
OOFW01000122
237766
Gammaproteobacteria
TAC
Val
>WENV183622615
OOFW01000122
237766
Gammaproteobacteria
TAC
Val
>WENV183622638
OOFW01000577
237766
Gammaproteobacteria
TAC
Val
>WENV183622639
OOFW01000577
237766
Gammaproteobacteria
TAC
Val
>WENV183622792
OOFW01010014
237766
Gammaproteobacteria
TAC
Val
>WENV183622881
OOFW01033478
10850
Gammaproteobacteria
TGA
Ser
>WENV183622673
OOFW01001204
10850
Gammaproteobacteria
TGA
Ser
>WENV183622885
OOFW01035983
262546
Gammaproteobacteria
TGC
Ala
>WENV183622845
OOFW01023353
262546
Gammaproteobacteria
TGC
Ala
>WENV183622825
OOFW01017747
262546
Gammaproteobacteria
TGC
Ala
>WENV183622772
OOFW01007482
150648
Gammaproteobacteria
TGG
Pro
>WENV183622636
OOFW01000513
150648
Gammaproteobacteria
TGG
Pro
>WENV183622632
OOFW01000513
150648
Gammaproteobacteria
TGG
Pro
>WENV183622711
OOFW01002275
277901
Gammaproteobacteria
TGT
Thr
>WENV183622659
OOFW01000885
277901
Gammaproteobacteria
TGT
Thr
>WENV183622624
OOFW01000303
277901
Gammaproteobacteria
TGT
Thr
>WENV183622900
OOFW01041036
237421
Gammaproteobacteria
TGT
Thr
>WENV183622790
OOFW01009858
288001
Gammaproteobacteria
TTG
Gln
>WENV183622657
OOFW01000864
288001
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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