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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183623418
OOGA01000445
235886
Gammaproteobacteria
TTC
Glu
>WENV183623486
OOGA01004708
150648
Gammaproteobacteria
TGG
Pro
>WENV183623525
OOGA01007016
277901
Gammaproteobacteria
TGT
Thr
>WENV183623578
OOGA01012931
313881
Gammaproteobacteria
GGC
Ala
>WENV183623602
OOGA01016625
419491
Gammaproteobacteria
CTG
Gln
>WENV183623636
OOGA01023605
281920
Gammaproteobacteria
CCA
Trp
>WENV183623643
OOGA01024924
113872
Gammaproteobacteria
GTA
Tyr
>WENV183623739
OOGA01058121
319098
Gammaproteobacteria
TAC
Val
>WENV183623746
OOGA01060365
412799
Gammaproteobacteria
GCA
Cys
>WENV183623747
OOGA01060365
59979
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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