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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183628522
OOGO01000547
166654
Gammaproteobacteria
GAC
Val
>WENV183628489
OOGO01000058
235887
Gammaproteobacteria
GTG
His
>WENV183628598
OOGO01002826
237766
Gammaproteobacteria
TAC
Val
>WENV183628599
OOGO01002826
237766
Gammaproteobacteria
TAC
Val
>WENV183628512
OOGO01000232
277725
Gammaproteobacteria
TAC
Val
>WENV183628480
OOGO01000013
145368
Gammaproteobacteria
CCT
Arg
>WENV183628562
OOGO01001157
281920
Gammaproteobacteria
CCA
Trp
>WENV183628496
OOGO01000108
58822
Gammaproteobacteria
CAA
Leu
>WENV183628631
OOGO01003765
147053
Gammaproteobacteria
GTT
Asn
>WENV183628518
OOGO01000390
147053
Gammaproteobacteria
GTT
Asn
>WENV183628493
OOGO01000071
145367
Gammaproteobacteria
GGG
Pro
>WENV183628563
OOGO01001172
269248
Gammaproteobacteria
CCA
Trp
>WENV183628588
OOGO01002381
163940
Gammaproteobacteria
CCG
Arg
>WENV183628606
OOGO01003029
191831
Gammaproteobacteria
ACG
Arg
>WENV183628605
OOGO01003029
191831
Gammaproteobacteria
ACG
Arg
>WENV183628604
OOGO01003029
191831
Gammaproteobacteria
ACG
Arg
>WENV183628871
OOGO01047306
149036
Gammaproteobacteria
CCA
Trp
>WENV183628714
OOGO01010092
149036
Gammaproteobacteria
CCA
Trp
>WENV183628499
OOGO01000141
145366
Gammaproteobacteria
ACG
Arg
>WENV183628500
OOGO01000141
145366
Gammaproteobacteria
ACG
Arg
>WENV183628517
OOGO01000311
16284
Gammaproteobacteria
TGA
Ser
>WENV183628485
OOGO01000047
145369
Gammaproteobacteria
CGG
Pro
>WENV183628608
OOGO01003220
174801
Gammaproteobacteria
TGG
Pro
>WENV183628764
OOGO01020127
45345
Gammaproteobacteria
GGA
Ser
>WENV183628544
OOGO01000765
412799
Gammaproteobacteria
GCA
Cys
>WENV183628929
OOGO01066943
97031
Gammaproteobacteria
TAG
Leu
>WENV183628546
OOGO01000817
277901
Gammaproteobacteria
TGT
Thr
>WENV183628539
OOGO01000755
277901
Gammaproteobacteria
TGT
Thr
>WENV183628930
OOGO01066943
149038
Gammaproteobacteria
TGG
Pro
>WENV183628486
OOGO01000053
145365
Gammaproteobacteria
GAC
Val
>WENV183628572
OOGO01002054
235886
Gammaproteobacteria
TTC
Glu
>WENV183628487
OOGO01000058
186449
Gammaproteobacteria
TGG
Pro
>WENV183628595
OOGO01002677
243921
Gammaproteobacteria
TTT
Lys
>WENV183628594
OOGO01002677
243921
Gammaproteobacteria
TTT
Lys
>WENV183628548
OOGO01000965
262546
Gammaproteobacteria
TGC
Ala
>WENV183628505
OOGO01000198
262546
Gammaproteobacteria
TGC
Ala
>WENV183628510
OOGO01000232
235884
Gammaproteobacteria
TAC
Val
>WENV183628484
OOGO01000043
411735
Gammaproteobacteria
GCA
Cys
>WENV183628862
OOGO01044175
175964
Gammaproteobacteria
CAT
Met
>WENV183628528
OOGO01000684
150648
Gammaproteobacteria
TGG
Pro
>WENV183628492
OOGO01000062
277196
Gammaproteobacteria
GAA
Phe
>WENV183628673
OOGO01006802
10850
Gammaproteobacteria
TGA
Ser
>WENV183628927
OOGO01066604
150183
Gammaproteobacteria
CCG
Arg
>WENV183628801
OOGO01028338
288001
Gammaproteobacteria
TTG
Gln
>WENV183628545
OOGO01000765
59979
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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