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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183629112
OOGP01004384
312287
Gammaproteobacteria
TGT
Thr
>WENV183629546
OOGP01066771
115067
Gammaproteobacteria
GTA
Tyr
>WENV183628978
OOGP01000399
248041
Gammaproteobacteria
GGC
Ala
>WENV183629385
OOGP01031409
17426
Gammaproteobacteria
GCT
Ser
>WENV183629044
OOGP01001793
149578
Gammaproteobacteria
ACG
Arg
>WENV183629141
OOGP01005392
236366
Gammaproteobacteria
GTG
His
>WENV183629506
OOGP01056171
153865
Gammaproteobacteria
CCG
Arg
>WENV183629193
OOGP01008010
322642
Gammaproteobacteria
GGT
Thr
>WENV183629145
OOGP01005398
322642
Gammaproteobacteria
GGT
Thr
>WENV183629177
OOGP01007187
292565
Gammaproteobacteria
TTC
Glu
>WENV183629342
OOGP01025838
247974
Gammaproteobacteria
CCA
Trp
>WENV183629455
OOGP01044764
412476
Gammaproteobacteria
TCC
Gly
>WENV183629003
OOGP01000859
319098
Gammaproteobacteria
TAC
Val
>WENV183629137
OOGP01005264
411842
Gammaproteobacteria
GCA
Cys
>WENV183629266
OOGP01015442
149661
Gammaproteobacteria
CAT
Met
>WENV183629190
OOGP01008010
237421
Gammaproteobacteria
TGT
Thr
>WENV183629291
OOGP01017592
16840
Gammaproteobacteria
GGA
Ser
>WENV183629264
OOGP01015400
245151
Gammaproteobacteria
GTG
His
>WENV183629059
OOGP01002375
288517
Gammaproteobacteria
TGT
Thr
>WENV183629283
OOGP01016504
198797
Gammaproteobacteria
TGG
Pro
>WENV183629225
OOGP01010717
198797
Gammaproteobacteria
TGG
Pro
>WENV183629136
OOGP01005264
270352
Gammaproteobacteria
GCC
Gly
>WENV183629501
OOGP01054919
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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