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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170003805
AGTN01458666
273448
Alphaproteobacteria
CGG
Pro
>WENV170004234
AGTN01611949
273448
Alphaproteobacteria
CGG
Pro
>WENV170003114
AGTN01230111
180577
Alphaproteobacteria
TAG
Leu
>WENV170003253
AGTN01275872
248466
Alphaproteobacteria
CCA
Trp
>WENV170002384
AGTN01014042
452565
Alphaproteobacteria
GAA
Phe
>WENV170002440
AGTN01029961
494846
Alphaproteobacteria
TGC
Ala
>WENV170003343
AGTN01305540
494846
Alphaproteobacteria
TGC
Ala
>WENV170004178
AGTN01590245
288840
Alphaproteobacteria
TGG
Pro
>WENV170004111
AGTN01563449
303829
Alphaproteobacteria
GTC
Asp
>WENV170002519
AGTN01057876
456473
Alphaproteobacteria
GGC
Ala
>WENV170003614
AGTN01397045
780260
Alphaproteobacteria
GCA
Cys
>WENV170003232
AGTN01267107
653814
Alphaproteobacteria
TAC
Val
>WENV170003778
AGTN01447842
654913
Alphaproteobacteria
GTT
Asn
>WENV170003510
AGTN01363334
454180
Alphaproteobacteria
CGT
Thr
>WENV170002491
AGTN01049094
273447
Alphaproteobacteria
CCT
Arg
>WENV170004021
AGTN01537567
273447
Alphaproteobacteria
CCT
Arg
>WENV170004515
AGTN01706398
273447
Alphaproteobacteria
CCT
Arg
>WENV170003785
AGTN01450763
271417
Alphaproteobacteria
GAT
Ile
>WENV170004019
AGTN01537553
271417
Alphaproteobacteria
GAT
Ile
>WENV170004633
AGTN01742124
245051
Alphaproteobacteria
GGG
Pro
>WENV170004306
AGTN01632295
457350
Alphaproteobacteria
CTT
Lys
>WENV170002831
AGTN01141910
659897
Alphaproteobacteria
GAC
Val
>WENV170003047
AGTN01210038
454623
Alphaproteobacteria
TAC
Val
>WENV170003434
AGTN01331980
454623
Alphaproteobacteria
TAC
Val
>WENV170003965
AGTN01517635
454623
Alphaproteobacteria
TAC
Val
>WENV170004076
AGTN01554024
780631
Alphaproteobacteria
CTG
Gln
>WENV170003692
AGTN01417988
48659
Alphaproteobacteria
CGA
Ser
>WENV170002836
AGTN01143933
656942
Alphaproteobacteria
TTC
Glu
>WENV170003764
AGTN01442642
465568
Alphaproteobacteria
GGC
Ala
>WENV170004044
AGTN01544416
465568
Alphaproteobacteria
GGC
Ala
>WENV170003463
AGTN01343542
453945
Alphaproteobacteria
CTT
Lys
>WENV170002387
AGTN01014982
278344
Alphaproteobacteria
CAT
Met
>WENV170002928
AGTN01171562
278344
Alphaproteobacteria
CAT
Met
>WENV170003553
AGTN01372873
278344
Alphaproteobacteria
CAT
Met
>WENV170004360
AGTN01657302
278344
Alphaproteobacteria
CAT
Met
>WENV170002389
AGTN01015872
272978
Alphaproteobacteria
CGG
Pro
>WENV170004282
AGTN01627960
454642
Alphaproteobacteria
TAC
Val
>WENV170003786
AGTN01450763
452339
Alphaproteobacteria
TGC
Ala
>WENV170004020
AGTN01537553
452339
Alphaproteobacteria
TGC
Ala
>WENV170003967
AGTN01518329
180320
Alphaproteobacteria
TAG
Leu
>WENV170003433
AGTN01331913
271419
Alphaproteobacteria
CCT
Arg
>WENV170003069
AGTN01217278
653813
Alphaproteobacteria
GAC
Val
>WENV170002821
AGTN01139326
282090
Alphaproteobacteria
CAT
Met
>WENV170002989
AGTN01186193
654017
Alphaproteobacteria
TGT
Thr
>WENV170004452
AGTN01683384
654946
Alphaproteobacteria
TTG
Gln
>WENV170004537
AGTN01711820
273908
Alphaproteobacteria
CCG
Arg
>WENV170003639
AGTN01403158
663782
Alphaproteobacteria
TTG
Gln
>WENV170003486
AGTN01352254
113126
Alphaproteobacteria
CAG
Leu
>WENV170003989
AGTN01527221
661074
Alphaproteobacteria
GCC
Gly
>WENV170003927
AGTN01504234
653518
Alphaproteobacteria
GAC
Val
>WENV170002459
AGTN01037458
452344
Alphaproteobacteria
GGC
Ala
>WENV170003315
AGTN01295197
653931
Alphaproteobacteria
GTT
Asn
>WENV170002939
AGTN01174324
112838
Alphaproteobacteria
GAG
Leu
>WENV170003386
AGTN01320589
297864
Alphaproteobacteria
GTC
Asp
>WENV170004067
AGTN01549928
452349
Alphaproteobacteria
CAT
Met
>WENV170003076
AGTN01221822
181042
Alphaproteobacteria
GAG
Leu
>WENV170002746
AGTN01116217
454166
Alphaproteobacteria
CGC
Ala
>WENV170002655
AGTN01093629
660487
Alphaproteobacteria
GCC
Gly
>WENV170003066
AGTN01216180
299073
Alphaproteobacteria
GAT
Ile
>WENV170002471
AGTN01040859
454489
Alphaproteobacteria
CGC
Ala
>WENV170003500
AGTN01359637
454489
Alphaproteobacteria
CGC
Ala
>WENV170002606
AGTN01081945
452342
Alphaproteobacteria
GTT
Asn
>WENV170003949
AGTN01511467
452342
Alphaproteobacteria
GTT
Asn
>WENV170002755
AGTN01119903
307694
Alphaproteobacteria
ACG
Arg
>WENV170004116
AGTN01565027
307694
Alphaproteobacteria
ACG
Arg
>WENV170004265
AGTN01620683
116949
Alphaproteobacteria
CAG
Leu
>WENV170002431
AGTN01028470
276396
Alphaproteobacteria
CCT
Arg
>WENV170003036
AGTN01206985
276396
Alphaproteobacteria
CCT
Arg
>WENV170003610
AGTN01396550
780039
Alphaproteobacteria
GCA
Cys
>WENV170004052
AGTN01546796
780039
Alphaproteobacteria
GCA
Cys
>WENV170002671
AGTN01097395
271418
Alphaproteobacteria
CGG
Pro
>WENV170002547
AGTN01064447
462956
Alphaproteobacteria
GGC
Ala
>WENV170004434
AGTN01676540
779596
Alphaproteobacteria
TCC
Gly
>WENV170004042
AGTN01544070
654915
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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