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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170107923
CEBY01065346
466895
Bacillota
TGC
Ala
>WENV170106733
CEBY01011916
275710
Bacillota
CCG
Arg
>WENV170107657
CEBY01052326
275710
Bacillota
CCG
Arg
>WENV170107694
CEBY01054213
275710
Bacillota
CCG
Arg
>WENV170106701
CEBY01009828
270416
Bacillota
CAC
Val
>WENV170106908
CEBY01020574
270416
Bacillota
CAC
Val
>WENV170107521
CEBY01045768
270416
Bacillota
CAC
Val
>WENV170107788
CEBY01058410
653346
Bacillota
TTC
Glu
>WENV170107834
CEBY01061429
8223
Bacillota
GCT
Ser
>WENV170106988
CEBY01024606
270488
Bacillota
GTC
Asp
>WENV170106968
CEBY01023701
779387
Bacillota
TTG
Gln
>WENV170107227
CEBY01034085
779387
Bacillota
TTG
Gln
>WENV170107512
CEBY01045293
779387
Bacillota
TTG
Gln
>WENV170107674
CEBY01052743
284731
Bacillota
GTC
Asp
>WENV170107622
CEBY01050754
655659
Bacillota
CTG
Gln
>WENV170107037
CEBY01026626
465106
Bacillota
TGT
Thr
>WENV170107259
CEBY01035674
466790
Bacillota
CGG
Pro
>WENV170107229
CEBY01034091
451373
Bacillota
TTT
Lys
>WENV170107058
CEBY01027746
270426
Bacillota
GAT
Ile
>WENV170107712
CEBY01054817
270426
Bacillota
GAT
Ile
>WENV170107024
CEBY01026578
451355
Bacillota
GAC
Val
>WENV170107026
CEBY01026604
451355
Bacillota
GAC
Val
>WENV170107459
CEBY01043176
451355
Bacillota
GAC
Val
>WENV170107474
CEBY01043598
451355
Bacillota
GAC
Val
>WENV170107545
CEBY01047004
451355
Bacillota
GAC
Val
>WENV170106888
CEBY01019272
456796
Bacillota
GGC
Ala
>WENV170107056
CEBY01027744
653367
Bacillota
CTC
Glu
>WENV170107012
CEBY01025625
270438
Bacillota
TCT
Arg
>WENV170107348
CEBY01037949
270438
Bacillota
TCT
Arg
>WENV170107489
CEBY01044057
270438
Bacillota
TCT
Arg
>WENV170107023
CEBY01026524
451352
Bacillota
GGT
Thr
>WENV170107063
CEBY01028203
451352
Bacillota
GGT
Thr
>WENV170107476
CEBY01043653
451352
Bacillota
GGT
Thr
>WENV170107543
CEBY01046795
451352
Bacillota
GGT
Thr
>WENV170106992
CEBY01024606
275959
Bacillota
CAT
Met
>WENV170106564
CEBY01003836
112239
Bacillota
CAG
Leu
>WENV170107547
CEBY01047271
112239
Bacillota
CAG
Leu
>WENV170106949
CEBY01022587
153689
Bacillota
GTA
Tyr
>WENV170106592
CEBY01005425
86865
Bacillota
AAG
Leu
>WENV170107833
CEBY01061193
779389
Bacillota
TCC
Gly
>WENV170107922
CEBY01065346
274593
Bacillota
GAT
Ile
>WENV170106915
CEBY01021039
287917
Bacillota
GAT
Ile
>WENV170107002
CEBY01024992
466782
Bacillota
CCC
Gly
>WENV170107500
CEBY01044746
466782
Bacillota
CCC
Gly
>WENV170107582
CEBY01048846
466782
Bacillota
CCC
Gly
>WENV170107782
CEBY01057977
179909
Bacillota
GTA
Tyr
>WENV170106553
CEBY01003723
661891
Bacillota
GCC
Gly
>WENV170107067
CEBY01028293
661891
Bacillota
GCC
Gly
>WENV170107675
CEBY01052743
661891
Bacillota
GCC
Gly
>WENV170107019
CEBY01026052
779385
Bacillota
CTG
Gln
>WENV170107173
CEBY01031805
779385
Bacillota
CTG
Gln
>WENV170107239
CEBY01034700
779385
Bacillota
CTG
Gln
>WENV170107526
CEBY01045956
779385
Bacillota
CTG
Gln
>WENV170107574
CEBY01048586
779385
Bacillota
CTG
Gln
>WENV170106838
CEBY01017023
451414
Bacillota
TGC
Ala
>WENV170107787
CEBY01058410
270546
Bacillota
CAT
Met
>WENV170106600
CEBY01005866
20504
Bacillota
GGA
Ser
>WENV170106774
CEBY01012970
451384
Bacillota
TGG
Pro
>WENV170107711
CEBY01054801
451384
Bacillota
TGG
Pro
>WENV170106837
CEBY01016916
466773
Bacillota
GGC
Ala
>WENV170107676
CEBY01052743
466856
Bacillota
CCA
Trp
>WENV170106572
CEBY01004294
451375
Bacillota
GGC
Ala
>WENV170107186
CEBY01031901
451375
Bacillota
GGC
Ala
>WENV170107718
CEBY01054856
451375
Bacillota
GGC
Ala
>WENV170106541
CEBY01003047
270447
Bacillota
GTT
Asn
>WENV170106987
CEBY01024322
270447
Bacillota
GTT
Asn
>WENV170107030
CEBY01026616
270447
Bacillota
GTT
Asn
>WENV170106670
CEBY01008344
653369
Bacillota
CTC
Glu
>WENV170107136
CEBY01030281
653369
Bacillota
CTC
Glu
>WENV170107416
CEBY01041506
451376
Bacillota
GCC
Gly
>WENV170106596
CEBY01005845
457194
Bacillota
TAC
Val
>WENV170106598
CEBY01005845
457194
Bacillota
TAC
Val
>WENV170106989
CEBY01024606
457194
Bacillota
TAC
Val
>WENV170107908
CEBY01064412
451334
Bacillota
TGT
Thr
>WENV170107781
CEBY01057963
653347
Bacillota
TGT
Thr
>WENV170106568
CEBY01004256
270405
Bacillota
ACG
Arg
>WENV170106677
CEBY01008454
270405
Bacillota
ACG
Arg
>WENV170106937
CEBY01022129
454988
Bacillota
TGC
Ala
>WENV170106580
CEBY01004305
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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