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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
224 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV000039
AB222626
301036
Gammaproteobacteria
GAT
Ile
>ENV000923
AY172146
301036
Gammaproteobacteria
GAT
Ile
>ENV000929
AY172149
301036
Gammaproteobacteria
GAT
Ile
>ENV000931
AY172150
301036
Gammaproteobacteria
GAT
Ile
>ENV000889
AY033301
270982
Gammaproteobacteria
GAT
Ile
>ENV000954
AY235676
270982
Gammaproteobacteria
GAT
Ile
>ENV000956
AY235677
270982
Gammaproteobacteria
GAT
Ile
>ENV000958
AY235678
270982
Gammaproteobacteria
GAT
Ile
>ENV000960
AY235679
270982
Gammaproteobacteria
GAT
Ile
>ENV000962
AY235680
270982
Gammaproteobacteria
GAT
Ile
>ENV001041
AY458646
270982
Gammaproteobacteria
GAT
Ile
>ENV002494
AY934140
270982
Gammaproteobacteria
GAT
Ile
>ENV002499
AY934143
270982
Gammaproteobacteria
GAT
Ile
>ENV002503
AY934145
270982
Gammaproteobacteria
GAT
Ile
>ENV002516
AY934152
270982
Gammaproteobacteria
GAT
Ile
>ENV002526
AY934158
270982
Gammaproteobacteria
GAT
Ile
>ENV002528
AY934159
270982
Gammaproteobacteria
GAT
Ile
>ENV002530
AY934160
270982
Gammaproteobacteria
GAT
Ile
>ENV002532
AY934161
270982
Gammaproteobacteria
GAT
Ile
>ENV002548
AY934170
270982
Gammaproteobacteria
GAT
Ile
>ENV002552
AY934172
270982
Gammaproteobacteria
GAT
Ile
>ENV002555
AY934174
270982
Gammaproteobacteria
GAT
Ile
>ENV002561
AY934177
270982
Gammaproteobacteria
GAT
Ile
>ENV002565
AY934179
270982
Gammaproteobacteria
GAT
Ile
>ENV002567
AY934180
270982
Gammaproteobacteria
GAT
Ile
>ENV002865
AY934339
270982
Gammaproteobacteria
GAT
Ile
>ENV002879
AY934347
270982
Gammaproteobacteria
GAT
Ile
>ENV002889
AY934352
270982
Gammaproteobacteria
GAT
Ile
>ENV002911
AY934367
270982
Gammaproteobacteria
GAT
Ile
>ENV002913
AY934368
270982
Gammaproteobacteria
GAT
Ile
>ENV002929
AY934376
270982
Gammaproteobacteria
GAT
Ile
>ENV002980
AY934405
270982
Gammaproteobacteria
GAT
Ile
>ENV002987
AY934409
270982
Gammaproteobacteria
GAT
Ile
>ENV003003
AY934417
270982
Gammaproteobacteria
GAT
Ile
>ENV003009
AY934420
270982
Gammaproteobacteria
GAT
Ile
>ENV003014
AY934423
270982
Gammaproteobacteria
GAT
Ile
>ENV003205
DQ009126
270982
Gammaproteobacteria
GAT
Ile
>ENV003207
DQ009127
270982
Gammaproteobacteria
GAT
Ile
>ENV003211
DQ009129
270982
Gammaproteobacteria
GAT
Ile
>ENV003213
DQ009130
270982
Gammaproteobacteria
GAT
Ile
>ENV003224
DQ009136
270982
Gammaproteobacteria
GAT
Ile
>ENV003643
DQ009372
270982
Gammaproteobacteria
GAT
Ile
>ENV003645
DQ009373
270982
Gammaproteobacteria
GAT
Ile
>ENV003717
DQ009424
270982
Gammaproteobacteria
GAT
Ile
>ENV003791
DQ009465
270982
Gammaproteobacteria
GAT
Ile
>ENV003794
DQ009467
270982
Gammaproteobacteria
GAT
Ile
>ENV001307
AY627375
272023
Gammaproteobacteria
GAT
Ile
>ENV002582
AY934188
272023
Gammaproteobacteria
GAT
Ile
>ENV002584
AY934189
272023
Gammaproteobacteria
GAT
Ile
>ENV002588
AY934191
272023
Gammaproteobacteria
GAT
Ile
>ENV002590
AY934192
272023
Gammaproteobacteria
GAT
Ile
>ENV002592
AY934193
272023
Gammaproteobacteria
GAT
Ile
>ENV002594
AY934194
272023
Gammaproteobacteria
GAT
Ile
>ENV002596
AY934195
272023
Gammaproteobacteria
GAT
Ile
>ENV002598
AY934196
272023
Gammaproteobacteria
GAT
Ile
>ENV002600
AY934197
272023
Gammaproteobacteria
GAT
Ile
>ENV002602
AY934198
272023
Gammaproteobacteria
GAT
Ile
>ENV002604
AY934199
272023
Gammaproteobacteria
GAT
Ile
>ENV002606
AY934200
272023
Gammaproteobacteria
GAT
Ile
>ENV002685
AY934240
272023
Gammaproteobacteria
GAT
Ile
>ENV002687
AY934241
272023
Gammaproteobacteria
GAT
Ile
>ENV002689
AY934242
272023
Gammaproteobacteria
GAT
Ile
>ENV002691
AY934243
272023
Gammaproteobacteria
GAT
Ile
>ENV002729
AY934263
272023
Gammaproteobacteria
GAT
Ile
>ENV002733
AY934265
272023
Gammaproteobacteria
GAT
Ile
>ENV002737
AY934267
272023
Gammaproteobacteria
GAT
Ile
>ENV002743
AY934270
272023
Gammaproteobacteria
GAT
Ile
>ENV002747
AY934272
272023
Gammaproteobacteria
GAT
Ile
>ENV002753
AY934275
272023
Gammaproteobacteria
GAT
Ile
>ENV002755
AY934276
272023
Gammaproteobacteria
GAT
Ile
>ENV002757
AY934277
272023
Gammaproteobacteria
GAT
Ile
>ENV002759
AY934278
272023
Gammaproteobacteria
GAT
Ile
>ENV002775
AY934288
272023
Gammaproteobacteria
GAT
Ile
>ENV002781
AY934293
272023
Gammaproteobacteria
GAT
Ile
>ENV002783
AY934294
272023
Gammaproteobacteria
GAT
Ile
>ENV002785
AY934295
272023
Gammaproteobacteria
GAT
Ile
>ENV002787
AY934296
272023
Gammaproteobacteria
GAT
Ile
>ENV002794
AY934300
272023
Gammaproteobacteria
GAT
Ile
>ENV002796
AY934301
272023
Gammaproteobacteria
GAT
Ile
>ENV002817
AY934312
272023
Gammaproteobacteria
GAT
Ile
>ENV002819
AY934313
272023
Gammaproteobacteria
GAT
Ile
>ENV002829
AY934319
272023
Gammaproteobacteria
GAT
Ile
>ENV002831
AY934320
272023
Gammaproteobacteria
GAT
Ile
>ENV002833
AY934321
272023
Gammaproteobacteria
GAT
Ile
>ENV002849
AY934330
272023
Gammaproteobacteria
GAT
Ile
>ENV002856
AY934334
272023
Gammaproteobacteria
GAT
Ile
>ENV002861
AY934337
272023
Gammaproteobacteria
GAT
Ile
>ENV002863
AY934338
272023
Gammaproteobacteria
GAT
Ile
>ENV002867
AY934340
272023
Gammaproteobacteria
GAT
Ile
>ENV002869
AY934341
272023
Gammaproteobacteria
GAT
Ile
>ENV002881
AY934348
272023
Gammaproteobacteria
GAT
Ile
>ENV002907
AY934365
272023
Gammaproteobacteria
GAT
Ile
>ENV002925
AY934374
272023
Gammaproteobacteria
GAT
Ile
>ENV002927
AY934375
272023
Gammaproteobacteria
GAT
Ile
>ENV002933
AY934378
272023
Gammaproteobacteria
GAT
Ile
>ENV002971
AY934400
272023
Gammaproteobacteria
GAT
Ile
>ENV002491
AY934138
307350
Gammaproteobacteria
GAT
Ile
>ENV002839
AY934325
281115
Gammaproteobacteria
GAT
Ile
>ENV000399
AF422526
479077
Gammaproteobacteria
TGC
Ala
>ENV002554
AY934173
273099
Gammaproteobacteria
GAT
Ile
>ENV002580
AY934187
273099
Gammaproteobacteria
GAT
Ile
>ENV002947
AY934385
273099
Gammaproteobacteria
GAT
Ile
>ENV002945
AY934384
273751
Gammaproteobacteria
GAT
Ile
>ENV002965
AY934397
273751
Gammaproteobacteria
GAT
Ile
>ENV002973
AY934401
273751
Gammaproteobacteria
GAT
Ile
>ENV002975
AY934402
273751
Gammaproteobacteria
GAT
Ile
>ENV003011
AY934421
273751
Gammaproteobacteria
GAT
Ile
>ENV003012
AY934422
273751
Gammaproteobacteria
GAT
Ile
>ENV001300
AY590683
290071
Gammaproteobacteria
GAT
Ile
>ENV001302
AY590684
290071
Gammaproteobacteria
GAT
Ile
>ENV001304
AY590685
290071
Gammaproteobacteria
GAT
Ile
>ENV001449
AY932859
290071
Gammaproteobacteria
GAT
Ile
>ENV001450
AY932860
290071
Gammaproteobacteria
GAT
Ile
>ENV002780
AY934292
290071
Gammaproteobacteria
GAT
Ile
>ENV002836
AY934323
290071
Gammaproteobacteria
GAT
Ile
>ENV001284
AY590664
290071
Gammaproteobacteria
GAT
Ile
>ENV001286
AY590665
290071
Gammaproteobacteria
GAT
Ile
>ENV001288
AY590666
290071
Gammaproteobacteria
GAT
Ile
>ENV001290
AY590667
290071
Gammaproteobacteria
GAT
Ile
>ENV001292
AY590668
290071
Gammaproteobacteria
GAT
Ile
>ENV001294
AY590680
290071
Gammaproteobacteria
GAT
Ile
>ENV001296
AY590681
290071
Gammaproteobacteria
GAT
Ile
>ENV001298
AY590682
290071
Gammaproteobacteria
GAT
Ile
>ENV000068
AB260935
180133
Gammaproteobacteria
GAG
Leu
>ENV000392
AF422517
301998
Gammaproteobacteria
GAT
Ile
>ENV000398
AF422526
301998
Gammaproteobacteria
GAT
Ile
>ENV002985
AY934408
271600
Gammaproteobacteria
GAT
Ile
>ENV002860
AY934336
271600
Gammaproteobacteria
GAT
Ile
>ENV003799
DQ009471
281813
Gammaproteobacteria
GAT
Ile
>ENV001458
AY933346
454814
Gammaproteobacteria
TAC
Val
>ENV002492
AY934138
452579
Gammaproteobacteria
TGC
Ala
>ENV002837
AY934323
452579
Gammaproteobacteria
TGC
Ala
>ENV002896
AY934357
273850
Gammaproteobacteria
GAT
Ile
>ENV002805
AY934305
456709
Gammaproteobacteria
TGC
Ala
>ENV002807
AY934306
456709
Gammaproteobacteria
TGC
Ala
>ENV002811
AY934308
456709
Gammaproteobacteria
TGC
Ala
>ENV002816
AY934311
456709
Gammaproteobacteria
TGC
Ala
>ENV002823
AY934315
456709
Gammaproteobacteria
TGC
Ala
>ENV002842
AY934326
456709
Gammaproteobacteria
TGC
Ala
>ENV000955
AY235676
467082
Gammaproteobacteria
TGC
Ala
>ENV000957
AY235677
467082
Gammaproteobacteria
TGC
Ala
>ENV000959
AY235678
467082
Gammaproteobacteria
TGC
Ala
>ENV000961
AY235679
467082
Gammaproteobacteria
TGC
Ala
>ENV000963
AY235680
467082
Gammaproteobacteria
TGC
Ala
>ENV003795
DQ009467
467082
Gammaproteobacteria
TGC
Ala
>ENV001447
AY932826
283256
Gammaproteobacteria
GAT
Ile
>ENV002962
AY934394
283256
Gammaproteobacteria
GAT
Ile
>ENV002969
AY934399
283256
Gammaproteobacteria
GAT
Ile
>ENV002977
AY934403
283256
Gammaproteobacteria
GAT
Ile
>ENV002997
AY934414
283256
Gammaproteobacteria
GAT
Ile
>ENV002999
AY934415
283256
Gammaproteobacteria
GAT
Ile
>ENV003001
AY934416
283256
Gammaproteobacteria
GAT
Ile
>ENV003007
AY934419
283256
Gammaproteobacteria
GAT
Ile
>ENV003017
AY934425
283256
Gammaproteobacteria
GAT
Ile
>ENV002522
AY934155
452602
Gammaproteobacteria
TGC
Ala
>ENV002919
AY934371
297870
Gammaproteobacteria
GAT
Ile
>ENV002894
AY934355
276152
Gammaproteobacteria
GAT
Ile
>ENV002964
AY934396
276152
Gammaproteobacteria
GAT
Ile
>ENV002979
AY934404
276152
Gammaproteobacteria
GAT
Ile
>ENV001306
AY627374
466186
Gammaproteobacteria
TGC
Ala
>ENV001451
AY933023
466186
Gammaproteobacteria
TGC
Ala
>ENV002520
AY934154
466186
Gammaproteobacteria
TGC
Ala
>ENV002611
AY934202
466186
Gammaproteobacteria
TGC
Ala
>ENV002613
AY934203
466186
Gammaproteobacteria
TGC
Ala
>ENV002615
AY934204
466186
Gammaproteobacteria
TGC
Ala
>ENV002617
AY934205
466186
Gammaproteobacteria
TGC
Ala
>ENV002619
AY934206
466186
Gammaproteobacteria
TGC
Ala
>ENV002621
AY934207
466186
Gammaproteobacteria
TGC
Ala
>ENV002623
AY934208
466186
Gammaproteobacteria
TGC
Ala
>ENV002625
AY934209
466186
Gammaproteobacteria
TGC
Ala
>ENV002629
AY934211
466186
Gammaproteobacteria
TGC
Ala
>ENV002630
AY934212
466186
Gammaproteobacteria
TGC
Ala
>ENV002632
AY934213
466186
Gammaproteobacteria
TGC
Ala
>ENV002636
AY934215
466186
Gammaproteobacteria
TGC
Ala
>ENV002638
AY934216
466186
Gammaproteobacteria
TGC
Ala
>ENV002640
AY934217
466186
Gammaproteobacteria
TGC
Ala
>ENV002642
AY934218
466186
Gammaproteobacteria
TGC
Ala
>ENV002644
AY934219
466186
Gammaproteobacteria
TGC
Ala
>ENV002646
AY934220
466186
Gammaproteobacteria
TGC
Ala
>ENV002648
AY934221
466186
Gammaproteobacteria
TGC
Ala
>ENV002650
AY934222
466186
Gammaproteobacteria
TGC
Ala
>ENV002652
AY934223
466186
Gammaproteobacteria
TGC
Ala
>ENV002654
AY934224
466186
Gammaproteobacteria
TGC
Ala
>ENV002658
AY934226
466186
Gammaproteobacteria
TGC
Ala
>ENV002660
AY934227
466186
Gammaproteobacteria
TGC
Ala
>ENV002662
AY934228
466186
Gammaproteobacteria
TGC
Ala
>ENV002664
AY934229
466186
Gammaproteobacteria
TGC
Ala
>ENV002666
AY934230
466186
Gammaproteobacteria
TGC
Ala
>ENV002668
AY934231
466186
Gammaproteobacteria
TGC
Ala
>ENV002676
AY934235
466186
Gammaproteobacteria
TGC
Ala
>ENV002678
AY934236
466186
Gammaproteobacteria
TGC
Ala
>ENV002680
AY934237
466186
Gammaproteobacteria
TGC
Ala
>ENV002682
AY934238
466186
Gammaproteobacteria
TGC
Ala
>ENV002684
AY934239
466186
Gammaproteobacteria
TGC
Ala
>ENV002698
AY934246
466186
Gammaproteobacteria
TGC
Ala
>ENV002700
AY934247
466186
Gammaproteobacteria
TGC
Ala
>ENV002702
AY934248
466186
Gammaproteobacteria
TGC
Ala
>ENV002708
AY934251
466186
Gammaproteobacteria
TGC
Ala
>ENV002711
AY934253
466186
Gammaproteobacteria
TGC
Ala
>ENV002715
AY934255
466186
Gammaproteobacteria
TGC
Ala
>ENV002717
AY934256
466186
Gammaproteobacteria
TGC
Ala
>ENV002721
AY934258
466186
Gammaproteobacteria
TGC
Ala
>ENV002728
AY934262
466186
Gammaproteobacteria
TGC
Ala
>ENV002732
AY934264
466186
Gammaproteobacteria
TGC
Ala
>ENV002742
AY934269
466186
Gammaproteobacteria
TGC
Ala
>ENV002750
AY934273
466186
Gammaproteobacteria
TGC
Ala
>ENV002762
AY934279
466186
Gammaproteobacteria
TGC
Ala
>ENV002764
AY934280
466186
Gammaproteobacteria
TGC
Ala
>ENV002767
AY934282
466186
Gammaproteobacteria
TGC
Ala
>ENV002772
AY934285
466186
Gammaproteobacteria
TGC
Ala
>ENV002916
AY934369
466186
Gammaproteobacteria
TGC
Ala
>ENV002918
AY934370
466186
Gammaproteobacteria
TGC
Ala
>ENV002926
AY934374
466186
Gammaproteobacteria
TGC
Ala
>ENV002928
AY934375
466186
Gammaproteobacteria
TGC
Ala
>ENV002932
AY934377
466186
Gammaproteobacteria
TGC
Ala
>ENV002934
AY934378
466186
Gammaproteobacteria
TGC
Ala
>ENV002938
AY934380
466186
Gammaproteobacteria
TGC
Ala
>ENV002972
AY934400
466186
Gammaproteobacteria
TGC
Ala
>ENV003216
DQ009131
466186
Gammaproteobacteria
TGC
Ala
>ENV002670
AY934232
466186
Gammaproteobacteria
TGC
Ala
>ENV002672
AY934233
466186
Gammaproteobacteria
TGC
Ala
>ENV002674
AY934234
466186
Gammaproteobacteria
TGC
Ala
>ENV002521
AY934155
291681
Gammaproteobacteria
GAT
Ile
>ENV000035
AB222623
462677
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK