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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170657539
JTFP01000627
510261
Bacteroidota
>WENV170657570
JTFP01002194
308706
Bacteroidota
GGC
Ala
>WENV170657575
JTFP01002591
509552
Bacteroidota
GAA
Phe
>WENV170657581
JTFP01003287
733362
Bacteroidota
TTC
Glu
>WENV170657591
JTFP01003876
515326
Bacteroidota
GCC
Gly
>WENV170657625
JTFP01005553
175022
Bacteroidota
GTA
Tyr
>WENV170657632
JTFP01005710
509539
Bacteroidota
TTT
Lys
>WENV170657688
JTFP01010260
308997
Bacteroidota
GTT
Asn
>WENV170657730
JTFP01013026
128389
Bacteroidota
CAA
Leu
>WENV170657801
JTFP01020920
734282
Bacteroidota
GGT
Thr
>WENV170657868
JTFP01027250
732818
Bacteroidota
TTC
Glu
>WENV170657919
JTFP01033379
746135
Bacteroidota
CTC
Glu
>WENV170658024
JTFP01046557
515326
Bacteroidota
GCC
Gly
>WENV170658029
JTFP01047137
871085
Bacteroidota
CCA
Trp
>WENV170658045
JTFP01048765
515326
Bacteroidota
GCC
Gly
>WENV170658048
JTFP01049162
511084
Bacteroidota
GCC
Gly
>WENV170658066
JTFP01050639
746136
Bacteroidota
CCT
Arg
>WENV170658155
JTFP01061789
307219
Bacteroidota
GTC
Asp
>WENV170658163
JTFP01062588
527336
Bacteroidota
>WENV170658202
JTFP01067260
532746
Bacteroidota
GGG
Pro
>WENV170658208
JTFP01068041
99496
Bacteroidota
TGA
Ser
>WENV170658233
JTFP01072938
528368
Bacteroidota
GCC
Gly
>WENV170658288
JTFP01081974
53239
Bacteroidota
GCT
Ser
>WENV170658290
JTFP01082276
307405
Bacteroidota
GTC
Asp
>WENV170658291
JTFP01082276
307405
Bacteroidota
GTC
Asp
>WENV170658314
JTFP01085014
528368
Bacteroidota
GCC
Gly
>WENV170658316
JTFP01085058
272254
Bacteroidota
TAC
Val
>WENV170658317
JTFP01085058
272254
Bacteroidota
TAC
Val
>WENV170658323
JTFP01087289
509539
Bacteroidota
TTT
Lys
>WENV170658329
JTFP01087748
508422
Bacteroidota
TCC
Gly
>WENV170658330
JTFP01087748
746066
Bacteroidota
GGT
Thr
>WENV170658327
JTFP01087748
306226
Bacteroidota
TGT
Thr
>WENV170658328
JTFP01087748
177215
Bacteroidota
GTA
Tyr
>WENV170658351
JTFP01092050
272478
Bacteroidota
TGG
Pro
>WENV170658350
JTFP01092050
99495
Bacteroidota
GCT
Ser
>WENV170658352
JTFP01092050
305425
Bacteroidota
TCT
Arg
>WENV170658408
JTFP01106062
272737
Bacteroidota
GGG
Pro
>WENV170658451
JTFP01114002
515232
Bacteroidota
GCC
Gly
>WENV170658453
JTFP01114357
733363
Bacteroidota
TTC
Glu
>WENV170658522
JTFP01131953
509539
Bacteroidota
TTT
Lys
>WENV170658535
JTFP01136282
511081
Bacteroidota
GAA
Phe
>WENV170658544
JTFP01138868
128220
Bacteroidota
GAG
Leu
>WENV170658545
JTFP01138868
528368
Bacteroidota
GCC
Gly
>WENV170658552
JTFP01141795
128247
Bacteroidota
TAA
Leu
>WENV170658551
JTFP01141795
507530
Bacteroidota
GCC
Gly
>WENV170658560
JTFP01143357
306902
Bacteroidota
>WENV170658570
JTFP01147612
872105
Bacteroidota
TTG
Gln
>WENV170658584
JTFP01151917
307219
Bacteroidota
GTC
Asp
>WENV170658591
JTFP01156467
99615
Bacteroidota
TGA
Ser
>WENV170658599
JTFP01159238
511084
Bacteroidota
GCC
Gly
>WENV170658617
JTFP01163401
308510
Bacteroidota
CAT
Met
>WENV170658646
JTFP01170677
512790
Bacteroidota
CTT
Lys
>WENV170658649
JTFP01171249
508423
Bacteroidota
TTT
Lys
>WENV170658651
JTFP01171604
515435
Bacteroidota
CCA
Trp
>WENV170658656
JTFP01173904
746135
Bacteroidota
CTC
Glu
>WENV170658659
JTFP01174997
307232
Bacteroidota
GTT
Asn
>WENV170658686
JTFP01180668
515326
Bacteroidota
GCC
Gly
>WENV170658701
JTFP01183447
733197
Bacteroidota
GGT
Thr
>WENV170658727
JTFP01192881
515326
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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