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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965747
MTEV01001903
273854
Gammaproteobacteria
CAT
Met
>WENV170965923
MTEV01009969
456952
Gammaproteobacteria
CGC
Ala
>WENV170965724
MTEV01001036
273349
Gammaproteobacteria
TCT
Arg
>WENV170965813
MTEV01004908
653594
Gammaproteobacteria
CCT
Arg
>WENV170965845
MTEV01006612
456552
Gammaproteobacteria
TGT
Thr
>WENV170965897
MTEV01008682
273870
Gammaproteobacteria
ACG
Arg
>WENV170966036
MTEV01012377
457154
Gammaproteobacteria
GAA
Phe
>WENV170965840
MTEV01006462
271254
Gammaproteobacteria
CAT
Met
>WENV170965686
MTEV01000129
456881
Gammaproteobacteria
GGC
Ala
>WENV170965980
MTEV01011533
655884
Gammaproteobacteria
CTC
Glu
>WENV170965913
MTEV01009462
275548
Gammaproteobacteria
GTC
Asp
>WENV170965803
MTEV01004347
779437
Gammaproteobacteria
CCC
Gly
>WENV170965692
MTEV01000314
12570
Gammaproteobacteria
GCT
Ser
>WENV170966037
MTEV01012377
655197
Gammaproteobacteria
TTG
Gln
>WENV170965838
MTEV01006323
780704
Gammaproteobacteria
GCA
Cys
>WENV170965720
MTEV01000928
87214
Gammaproteobacteria
GGA
Ser
>WENV170965690
MTEV01000232
454110
Gammaproteobacteria
GGT
Thr
>WENV170965786
MTEV01003615
451876
Gammaproteobacteria
GTG
His
>WENV170965687
MTEV01000129
456878
Gammaproteobacteria
TTC
Glu
>WENV170965771
MTEV01002753
456878
Gammaproteobacteria
TTC
Glu
>WENV170965773
MTEV01002753
456878
Gammaproteobacteria
TTC
Glu
>WENV170965723
MTEV01001036
275658
Gammaproteobacteria
TGG
Pro
>WENV170965972
MTEV01011187
179999
Gammaproteobacteria
CAA
Leu
>WENV170965778
MTEV01003512
270682
Gammaproteobacteria
TTG
Gln
>WENV170965800
MTEV01004056
113235
Gammaproteobacteria
GAG
Leu
>WENV170965781
MTEV01003563
780241
Gammaproteobacteria
GCA
Cys
>WENV170965926
MTEV01010049
86900
Gammaproteobacteria
TGA
Ser
>WENV170966038
MTEV01012377
454425
Gammaproteobacteria
TGT
Thr
>WENV170965717
MTEV01000928
655385
Gammaproteobacteria
GCC
Gly
>WENV170965719
MTEV01000928
655385
Gammaproteobacteria
GCC
Gly
>WENV170965772
MTEV01002753
655385
Gammaproteobacteria
GCC
Gly
>WENV170965780
MTEV01003563
655385
Gammaproteobacteria
GCC
Gly
>WENV170966019
MTEV01011876
459319
Gammaproteobacteria
GAA
Phe
>WENV170965789
MTEV01003809
270907
Gammaproteobacteria
TGG
Pro
>WENV170965892
MTEV01008431
779494
Gammaproteobacteria
GCA
Cys
>WENV170965830
MTEV01005912
271316
Gammaproteobacteria
CAT
Met
>WENV170965904
MTEV01009034
271316
Gammaproteobacteria
CAT
Met
>WENV170965967
MTEV01010991
271316
Gammaproteobacteria
CAT
Met
>WENV170965801
MTEV01004056
271253
Gammaproteobacteria
CAT
Met
>WENV170965774
MTEV01002783
270904
Gammaproteobacteria
CGG
Pro
>WENV170965978
MTEV01011467
270904
Gammaproteobacteria
CGG
Pro
>WENV170965682
MTEV01000080
472976
Gammaproteobacteria
TGT
Thr
>WENV170965824
MTEV01005735
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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