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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1016883
SRR035082.47164
272483
Chlorobiota
GTG
His
>SRA1018200
SRR035082.254988
272483
Chlorobiota
GTG
His
>SRA1017488
SRR035082.148445
453379
Chlorobiota
TGT
Thr
>SRA1018568
SRR035082.312095
453379
Chlorobiota
TGT
Thr
>SRA1019125
SRR035082.406202
453379
Chlorobiota
TGT
Thr
>SRA1017835
SRR035082.204388
272557
Chlorobiota
GGG
Pro
>SRA1018491
SRR035082.300183
272771
Chlorobiota
GAT
Ile
>SRA1019517
SRR035082.470182
272771
Chlorobiota
GAT
Ile
>SRA1019570
SRR035082.477647
272734
Chlorobiota
CAT
Met
>SRA1018428
SRR035082.290217
452251
Chlorobiota
CAT
Met
>SRA1017657
SRR035082.176058
453583
Chlorobiota
CGC
Ala
>SRA1019317
SRR035082.434668
271198
Chlorobiota
CAT
Met
>SRA1019571
SRR035082.477647
453695
Chlorobiota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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