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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1046915
SRR035093.418173
458396
Actinomycetota
CGC
Ala
>SRA1047376
SRR035093.526786
458396
Actinomycetota
CGC
Ala
>SRA1045688
SRR035093.148588
87226
Actinomycetota
GGA
Ser
>SRA1046224
SRR035093.256813
87226
Actinomycetota
GGA
Ser
>SRA1045525
SRR035093.111870
270748
Actinomycetota
CGG
Pro
>SRA1046048
SRR035093.223533
270748
Actinomycetota
CGG
Pro
>SRA1046248
SRR035093.261995
270748
Actinomycetota
CGG
Pro
>SRA1046685
SRR035093.359943
272594
Actinomycetota
CAT
Met
>SRA1046204
SRR035093.253153
780234
Actinomycetota
GCA
Cys
>SRA1046819
SRR035093.392789
780234
Actinomycetota
GCA
Cys
>SRA1046834
SRR035093.395679
780234
Actinomycetota
GCA
Cys
>SRA1046975
SRR035093.428870
452897
Actinomycetota
TAC
Val
>SRA1046170
SRR035093.249644
458398
Actinomycetota
CTC
Glu
>SRA1047512
SRR035093.561732
458398
Actinomycetota
CTC
Glu
>SRA1047063
SRR035093.446309
292076
Actinomycetota
GTC
Asp
>SRA1047093
SRR035093.453240
484425
Actinomycetota
TGG
Pro
>SRA1045447
SRR035093.95727
474429
Actinomycetota
TTC
Glu
>SRA1045932
SRR035093.201602
474429
Actinomycetota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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