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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1051487
SRR035098.13699
30557
Betaproteobacteria
CGA
Ser
>SRA1052245
SRR035098.166590
180151
Betaproteobacteria
GAG
Leu
>SRA1052587
SRR035098.232658
180151
Betaproteobacteria
GAG
Leu
>SRA1052968
SRR035098.309948
273217
Betaproteobacteria
ACG
Arg
>SRA1053090
SRR035098.334189
30557
Betaproteobacteria
CGA
Ser
>SRA1053326
SRR035098.382825
180151
Betaproteobacteria
GAG
Leu
>SRA1053545
SRR035098.433972
272932
Betaproteobacteria
GAC
Val
>SRA1053602
SRR035098.449992
289669
Betaproteobacteria
GAT
Ile
>SRA1053795
SRR035098.497691
273217
Betaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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