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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV080967
ABEF01017642
426418
Alphaproteobacteria
CTG
Gln
>WENV081108
ABEF01028621
365250
Alphaproteobacteria
GCC
Gly
>WENV081618
ABEF01052618
237493
Alphaproteobacteria
CCA
Trp
>WENV080839
ABEF01005911
58865
Alphaproteobacteria
GAG
Leu
>WENV081310
ABEF01042341
58865
Alphaproteobacteria
GAG
Leu
>WENV081013
ABEF01021568
147152
Alphaproteobacteria
ACG
Arg
>WENV081203
ABEF01034860
159305
Alphaproteobacteria
GTC
Asp
>WENV081636
ABEF01052867
185438
Alphaproteobacteria
GAT
Ile
>WENV081633
ABEF01052835
185438
Alphaproteobacteria
GAT
Ile
>WENV081361
ABEF01044008
185438
Alphaproteobacteria
GAT
Ile
>WENV081235
ABEF01037528
148353
Alphaproteobacteria
CAT
Met
>WENV081217
ABEF01036435
338282
Alphaproteobacteria
GTT
Asn
>WENV081011
ABEF01021489
338282
Alphaproteobacteria
GTT
Asn
>WENV080913
ABEF01013921
185767
Alphaproteobacteria
CCG
Arg
>WENV081247
ABEF01038240
95928
Alphaproteobacteria
TAG
Leu
>WENV080907
ABEF01013582
150677
Alphaproteobacteria
GTC
Asp
>WENV080959
ABEF01016967
339725
Alphaproteobacteria
GAA
Phe
>WENV080982
ABEF01019157
192195
Alphaproteobacteria
GTC
Asp
>WENV081438
ABEF01047482
258175
Alphaproteobacteria
CGC
Ala
>WENV081172
ABEF01032957
340106
Alphaproteobacteria
GCC
Gly
>WENV081350
ABEF01043726
369678
Alphaproteobacteria
GGT
Thr
>WENV081104
ABEF01028287
339609
Alphaproteobacteria
GGT
Thr
>WENV081521
ABEF01049927
147289
Alphaproteobacteria
GTC
Asp
>WENV080891
ABEF01012192
174413
Alphaproteobacteria
CAT
Met
>WENV081480
ABEF01048749
147286
Alphaproteobacteria
CGG
Pro
>WENV081449
ABEF01047930
147088
Alphaproteobacteria
CCT
Arg
>WENV081102
ABEF01028230
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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