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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170012948
ASRQ01000148
161528
Campylobacterota
CAT
Met
>WENV170012951
ASRQ01000180
191929
Campylobacterota
CAT
Met
>WENV170012932
ASRQ01000035
253656
Campylobacterota
CCA
Trp
>WENV170012945
ASRQ01000140
253656
Campylobacterota
CCA
Trp
>WENV170012947
ASRQ01000148
17638
Campylobacterota
GCT
Ser
>WENV170012938
ASRQ01000084
191925
Campylobacterota
GTC
Asp
>WENV170012946
ASRQ01000145
340892
Campylobacterota
GTT
Asn
>WENV170012995
ASRQ01003644
149512
Campylobacterota
GAT
Ile
>WENV170012987
ASRQ01001679
149512
Campylobacterota
GAT
Ile
>WENV170012924
ASRQ01000008
127427
Campylobacterota
TGG
Pro
>WENV170013005
ASRQ01004319
149516
Campylobacterota
CAT
Met
>WENV170012940
ASRQ01000096
61323
Campylobacterota
TAA
Leu
>WENV170012957
ASRQ01000232
254398
Campylobacterota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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