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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015552
AZIH01004579
238010
Alphaproteobacteria
TTT
Lys
>WENV170015613
AZIH01011485
113700
Alphaproteobacteria
>WENV170015515
AZIH01002337
338282
Alphaproteobacteria
GTT
Asn
>WENV170015578
AZIH01005972
339723
Alphaproteobacteria
>WENV170015597
AZIH01009053
147083
Alphaproteobacteria
GGG
Pro
>WENV170015616
AZIH01011787
339722
Alphaproteobacteria
TTG
Gln
>WENV170015516
AZIH01002338
147334
Alphaproteobacteria
CAT
Met
>WENV170015583
AZIH01006502
281594
Alphaproteobacteria
TGT
Thr
>WENV170015614
AZIH01011490
113716
Alphaproteobacteria
CAA
Leu
>WENV170015618
AZIH01011920
148158
Alphaproteobacteria
ACG
Arg
>WENV170015544
AZIH01004102
412477
Alphaproteobacteria
GCA
Cys
>WENV170015603
AZIH01010361
338760
Alphaproteobacteria
GAA
Phe
>WENV170015531
AZIH01003222
270451
Alphaproteobacteria
CGT
Thr
>WENV170015579
AZIH01006159
268365
Alphaproteobacteria
CCA
Trp
>WENV170015565
AZIH01005259
349650
Alphaproteobacteria
CAC
Val
>WENV170015621
AZIH01012135
338287
Alphaproteobacteria
GGT
Thr
>WENV170015624
AZIH01012344
127020
Alphaproteobacteria
TCT
Arg
>WENV170015539
AZIH01003493
147286
Alphaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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