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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170029933
CDYH01006561
144657
Bacteroidota
CGG
Pro
>WENV170030107
CDYH01020899
243025
Bacteroidota
CAT
Met
>WENV170030050
CDYH01014664
338155
Bacteroidota
CTC
Glu
>WENV170029825
CDYH01001737
339341
Bacteroidota
GGT
Thr
>WENV170029864
CDYH01003821
339341
Bacteroidota
GGT
Thr
>WENV170030009
CDYH01011213
58715
Bacteroidota
GAG
Leu
>WENV170029962
CDYH01008376
338486
Bacteroidota
CAT
Met
>WENV170029963
CDYH01008376
338486
Bacteroidota
CAT
Met
>WENV170029835
CDYH01001948
436206
Bacteroidota
TTG
Gln
>WENV170029819
CDYH01001737
20893
Bacteroidota
GGA
Ser
>WENV170030025
CDYH01012315
238121
Bacteroidota
CTT
Lys
>WENV170030024
CDYH01012315
238121
Bacteroidota
CTT
Lys
>WENV170029869
CDYH01003822
238121
Bacteroidota
CTT
Lys
>WENV170029868
CDYH01003822
238121
Bacteroidota
CTT
Lys
>WENV170029867
CDYH01003822
238121
Bacteroidota
CTT
Lys
>WENV170029866
CDYH01003822
238121
Bacteroidota
CTT
Lys
>WENV170030100
CDYH01020705
338132
Bacteroidota
GCA
Cys
>WENV170030030
CDYH01012475
338132
Bacteroidota
GCA
Cys
>WENV170030058
CDYH01015885
301449
Bacteroidota
CGG
Pro
>WENV170030029
CDYH01012474
144933
Bacteroidota
TCT
Arg
>WENV170030093
CDYH01020168
144933
Bacteroidota
TCT
Arg
>WENV170029954
CDYH01008020
143169
Bacteroidota
GGG
Pro
>WENV170030113
CDYH01021816
80607
Bacteroidota
GTA
Tyr
>WENV170030111
CDYH01021625
80614
Bacteroidota
>WENV170030092
CDYH01020008
80614
Bacteroidota
>WENV170029829
CDYH01001740
80614
Bacteroidota
>WENV170030122
CDYH01023124
95875
Bacteroidota
TAG
Leu
>WENV170029966
CDYH01008545
95875
Bacteroidota
TAG
Leu
>WENV170030027
CDYH01012474
240012
Bacteroidota
CCC
Gly
>WENV170029941
CDYH01007143
338165
Bacteroidota
GGT
Thr
>WENV170030056
CDYH01015884
19528
Bacteroidota
GGA
Ser
>WENV170029987
CDYH01009680
19528
Bacteroidota
GGA
Ser
>WENV170029953
CDYH01008020
425638
Bacteroidota
CTG
Gln
>WENV170029940
CDYH01007143
94703
Bacteroidota
GTA
Tyr
>WENV170029968
CDYH01008720
185921
Bacteroidota
GTC
Asp
>WENV170029827
CDYH01001740
185921
Bacteroidota
GTC
Asp
>WENV170030049
CDYH01014664
23696
Bacteroidota
GCT
Ser
>WENV170029875
CDYH01004389
56823
Bacteroidota
TGA
Ser
>WENV170029810
CDYH01000960
56823
Bacteroidota
TGA
Ser
>WENV170030010
CDYH01011421
151960
Bacteroidota
GGC
Ala
>WENV170030015
CDYH01011580
338125
Bacteroidota
CCT
Arg
>WENV170030007
CDYH01011213
235129
Bacteroidota
GCC
Gly
>WENV170029924
CDYH01006143
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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