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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170029923
CDYH01006142
449143
Bacteroidota
TTG
Gln
>WENV170030117
CDYH01022159
26247
Bacteroidota
CGA
Ser
>WENV170030078
CDYH01018747
65502
Bacteroidota
CAA
Leu
>WENV170029839
CDYH01002725
371247
Bacteroidota
TTC
Glu
>WENV170030016
CDYH01011719
160436
Bacteroidota
GGC
Ala
>WENV170029962
CDYH01008376
369581
Bacteroidota
>WENV170029963
CDYH01008376
369581
Bacteroidota
>WENV170029949
CDYH01007851
160416
Bacteroidota
GTG
His
>WENV170029883
CDYH01005445
371226
Bacteroidota
CCT
Arg
>WENV170029908
CDYH01005970
371226
Bacteroidota
CCT
Arg
>WENV170029915
CDYH01005970
371226
Bacteroidota
CCT
Arg
>WENV170029933
CDYH01006561
182139
Bacteroidota
CGG
Pro
>WENV170030011
CDYH01011422
139254
Bacteroidota
GAC
Val
>WENV170029954
CDYH01008020
144955
Bacteroidota
GGG
Pro
>WENV170030126
CDYH01023301
143081
Bacteroidota
TGG
Pro
>WENV170030050
CDYH01014664
374505
Bacteroidota
CTC
Glu
>WENV170029841
CDYH01002725
449098
Bacteroidota
>WENV170030009
CDYH01011213
71334
Bacteroidota
GAG
Leu
>WENV170029866
CDYH01003822
259271
Bacteroidota
CTT
Lys
>WENV170029867
CDYH01003822
259271
Bacteroidota
CTT
Lys
>WENV170029868
CDYH01003822
259271
Bacteroidota
CTT
Lys
>WENV170029869
CDYH01003822
259271
Bacteroidota
CTT
Lys
>WENV170030024
CDYH01012315
259271
Bacteroidota
CTT
Lys
>WENV170030025
CDYH01012315
259271
Bacteroidota
CTT
Lys
>WENV170029987
CDYH01009680
20980
Bacteroidota
GGA
Ser
>WENV170030056
CDYH01015884
20980
Bacteroidota
GGA
Ser
>WENV170029896
CDYH01005619
259272
Bacteroidota
CGT
Thr
>WENV170029988
CDYH01009873
258386
Bacteroidota
TTT
Lys
>WENV170029895
CDYH01005619
160417
Bacteroidota
GGC
Ala
>WENV170030087
CDYH01019110
162591
Bacteroidota
GTG
His
>WENV170029847
CDYH01003083
449090
Bacteroidota
CTG
Gln
>WENV170029972
CDYH01009084
449090
Bacteroidota
CTG
Gln
>WENV170030007
CDYH01011213
285851
Bacteroidota
GCC
Gly
>WENV170029810
CDYH01000960
54039
Bacteroidota
TGA
Ser
>WENV170029875
CDYH01004389
54039
Bacteroidota
TGA
Ser
>WENV170029992
CDYH01010400
139253
Bacteroidota
GGG
Pro
>WENV170030010
CDYH01011421
162594
Bacteroidota
GGC
Ala
>WENV170029803
CDYH01000002
65115
Bacteroidota
GAG
Leu
>WENV170029956
CDYH01008171
65115
Bacteroidota
GAG
Leu
>WENV170029826
CDYH01001737
293859
Bacteroidota
CCA
Trp
>WENV170029865
CDYH01003821
293859
Bacteroidota
CCA
Trp
>WENV170029889
CDYH01005446
193541
Bacteroidota
GTT
Asn
>WENV170029890
CDYH01005446
193541
Bacteroidota
GTT
Asn
>WENV170030012
CDYH01011580
193541
Bacteroidota
GTT
Asn
>WENV170030013
CDYH01011580
193541
Bacteroidota
GTT
Asn
>WENV170029825
CDYH01001737
369579
Bacteroidota
GGT
Thr
>WENV170029864
CDYH01003821
369579
Bacteroidota
GGT
Thr
>WENV170029824
CDYH01001737
89183
Bacteroidota
GTA
Tyr
>WENV170029829
CDYH01001740
89183
Bacteroidota
GTA
Tyr
>WENV170029863
CDYH01003821
89183
Bacteroidota
GTA
Tyr
>WENV170030092
CDYH01020008
89183
Bacteroidota
GTA
Tyr
>WENV170030111
CDYH01021625
89183
Bacteroidota
GTA
Tyr
>WENV170029965
CDYH01008545
448601
Bacteroidota
TTG
Gln
>WENV170030055
CDYH01015425
294337
Bacteroidota
CCC
Gly
>WENV170029946
CDYH01007608
21025
Bacteroidota
GGA
Ser
>WENV170030044
CDYH01014178
92319
Bacteroidota
GTA
Tyr
>WENV170029814
CDYH01001366
18452
Bacteroidota
GGA
Ser
>WENV170029819
CDYH01001737
18452
Bacteroidota
GGA
Ser
>WENV170029871
CDYH01003822
18452
Bacteroidota
GGA
Ser
>WENV170030101
CDYH01020705
371314
Bacteroidota
GCA
Cys
>WENV170029966
CDYH01008545
105282
Bacteroidota
TAG
Leu
>WENV170030122
CDYH01023124
105282
Bacteroidota
TAG
Leu
>WENV170030028
CDYH01012474
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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