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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170034389
CDYL01001624
144657
Bacteroidota
CGG
Pro
>WENV170034543
CDYL01009081
243025
Bacteroidota
CAT
Met
>WENV170034830
CDYL01024473
338155
Bacteroidota
CTC
Glu
>WENV170034953
CDYL01028860
338155
Bacteroidota
CTC
Glu
>WENV170034452
CDYL01004308
339341
Bacteroidota
GGT
Thr
>WENV170034514
CDYL01006999
58715
Bacteroidota
GAG
Leu
>WENV170034960
CDYL01029381
338486
Bacteroidota
CAT
Met
>WENV170034961
CDYL01029381
338486
Bacteroidota
CAT
Met
>WENV170035036
CDYL01033293
415410
Bacteroidota
TTG
Gln
>WENV170034687
CDYL01017224
415410
Bacteroidota
TTG
Gln
>WENV170034857
CDYL01025543
237247
Bacteroidota
TTT
Lys
>WENV170034760
CDYL01020620
237247
Bacteroidota
TTT
Lys
>WENV170034782
CDYL01022140
341950
Bacteroidota
>WENV170034582
CDYL01011414
238121
Bacteroidota
CTT
Lys
>WENV170034581
CDYL01011414
238121
Bacteroidota
CTT
Lys
>WENV170034793
CDYL01022652
338132
Bacteroidota
GCA
Cys
>WENV170034741
CDYL01019854
338132
Bacteroidota
GCA
Cys
>WENV170034677
CDYL01016907
338132
Bacteroidota
GCA
Cys
>WENV170034954
CDYL01029088
144933
Bacteroidota
TCT
Arg
>WENV170034826
CDYL01024042
144933
Bacteroidota
TCT
Arg
>WENV170034713
CDYL01018692
144933
Bacteroidota
TCT
Arg
>WENV170034577
CDYL01010871
144596
Bacteroidota
GGC
Ala
>WENV170034963
CDYL01029591
80607
Bacteroidota
GTA
Tyr
>WENV170034979
CDYL01030656
16999
Bacteroidota
GGA
Ser
>WENV170034900
CDYL01026625
80614
Bacteroidota
>WENV170034859
CDYL01025543
80614
Bacteroidota
>WENV170034762
CDYL01020620
80614
Bacteroidota
>WENV170034740
CDYL01019848
52358
Bacteroidota
TGA
Ser
>WENV170034548
CDYL01009602
52358
Bacteroidota
TGA
Ser
>WENV170034377
CDYL01000955
52358
Bacteroidota
TGA
Ser
>WENV170034373
CDYL01000195
52358
Bacteroidota
TGA
Ser
>WENV170035022
CDYL01032486
95875
Bacteroidota
TAG
Leu
>WENV170034714
CDYL01018692
240012
Bacteroidota
CCC
Gly
>WENV170034625
CDYL01014046
338165
Bacteroidota
GGT
Thr
>WENV170035039
CDYL01033513
19528
Bacteroidota
GGA
Ser
>WENV170034737
CDYL01019584
19528
Bacteroidota
GGA
Ser
>WENV170034378
CDYL01000955
19528
Bacteroidota
GGA
Ser
>WENV170034690
CDYL01017239
132360
Bacteroidota
GGG
Pro
>WENV170034416
CDYL01003027
132360
Bacteroidota
GGG
Pro
>WENV170034417
CDYL01003027
425638
Bacteroidota
CTG
Gln
>WENV170034834
CDYL01024779
425638
Bacteroidota
CTG
Gln
>WENV170034860
CDYL01025543
185921
Bacteroidota
GTC
Asp
>WENV170034754
CDYL01020620
185921
Bacteroidota
GTC
Asp
>WENV170034413
CDYL01002758
185921
Bacteroidota
GTC
Asp
>WENV170034952
CDYL01028860
23696
Bacteroidota
GCT
Ser
>WENV170034829
CDYL01024473
23696
Bacteroidota
GCT
Ser
>WENV170034673
CDYL01016593
151960
Bacteroidota
GGC
Ala
>WENV170034972
CDYL01030351
338125
Bacteroidota
CCT
Arg
>WENV170034745
CDYL01019859
338125
Bacteroidota
CCT
Arg
>WENV170034869
CDYL01025543
235129
Bacteroidota
GCC
Gly
>WENV170034867
CDYL01025543
235129
Bacteroidota
GCC
Gly
>WENV170034865
CDYL01025543
235129
Bacteroidota
GCC
Gly
>WENV170034512
CDYL01006999
235129
Bacteroidota
GCC
Gly
>WENV170034449
CDYL01004308
235129
Bacteroidota
GCC
Gly
>WENV170034447
CDYL01004308
235129
Bacteroidota
GCC
Gly
>WENV170034445
CDYL01004308
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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