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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170047163
CDYZ01016971
270088
Bacillota
CGT
Thr
>WENV170047154
CDYZ01016498
387058
Bacillota
CCT
Arg
>WENV170047734
CDYZ01052175
159247
Bacillota
>WENV170047993
CDYZ01065060
261394
Bacillota
CCG
Arg
>WENV170047617
CDYZ01044066
162485
Bacillota
CAT
Met
>WENV170047239
CDYZ01020706
369774
Bacillota
GGT
Thr
>WENV170047442
CDYZ01033324
369774
Bacillota
GGT
Thr
>WENV170047054
CDYZ01010962
369809
Bacillota
CTC
Glu
>WENV170047623
CDYZ01045527
369809
Bacillota
CTC
Glu
>WENV170047765
CDYZ01054130
269920
Bacillota
CGC
Ala
>WENV170047611
CDYZ01043732
286917
Bacillota
TGC
Ala
>WENV170046966
CDYZ01006873
143511
Bacillota
TGG
Pro
>WENV170046902
CDYZ01004967
49778
Bacillota
AAG
Leu
>WENV170047000
CDYZ01008357
272758
Bacillota
GCC
Gly
>WENV170047423
CDYZ01032346
269973
Bacillota
CCA
Trp
>WENV170047123
CDYZ01015064
162688
Bacillota
GAT
Ile
>WENV170047263
CDYZ01022047
162688
Bacillota
GAT
Ile
>WENV170047666
CDYZ01047149
162688
Bacillota
GAT
Ile
>WENV170047750
CDYZ01052859
162688
Bacillota
GAT
Ile
>WENV170047975
CDYZ01064352
162688
Bacillota
GAT
Ile
>WENV170048132
CDYZ01072309
162688
Bacillota
GAT
Ile
>WENV170047634
CDYZ01045531
106802
Bacillota
GTA
Tyr
>WENV170046868
CDYZ01002382
374673
Bacillota
CTC
Glu
>WENV170047079
CDYZ01012718
374673
Bacillota
CTC
Glu
>WENV170047592
CDYZ01042192
374673
Bacillota
CTC
Glu
>WENV170047957
CDYZ01063820
374673
Bacillota
CTC
Glu
>WENV170047337
CDYZ01027695
371263
Bacillota
TTG
Gln
>WENV170047450
CDYZ01033505
158271
Bacillota
CCT
Arg
>WENV170046970
CDYZ01006930
50190
Bacillota
AAG
Leu
>WENV170047471
CDYZ01034782
50190
Bacillota
AAG
Leu
>WENV170047234
CDYZ01020299
450551
Bacillota
CCA
Trp
>WENV170047283
CDYZ01023700
261358
Bacillota
GAA
Phe
>WENV170047767
CDYZ01054192
369776
Bacillota
CTG
Gln
>WENV170047103
CDYZ01013872
167205
Bacillota
TAC
Val
>WENV170047359
CDYZ01028879
167205
Bacillota
TAC
Val
>WENV170046943
CDYZ01005938
182424
Bacillota
CAT
Met
>WENV170047332
CDYZ01027289
261310
Bacillota
CGT
Thr
>WENV170047896
CDYZ01061220
261310
Bacillota
CGT
Thr
>WENV170047612
CDYZ01043792
283213
Bacillota
CTT
Lys
>WENV170047832
CDYZ01058056
283213
Bacillota
CTT
Lys
>WENV170047289
CDYZ01024239
261584
Bacillota
>WENV170047482
CDYZ01035182
261584
Bacillota
>WENV170047788
CDYZ01055263
448339
Bacillota
GCA
Cys
>WENV170047954
CDYZ01063467
448339
Bacillota
GCA
Cys
>WENV170047712
CDYZ01050621
276063
Bacillota
CTC
Glu
>WENV170046973
CDYZ01007174
162486
Bacillota
GAT
Ile
>WENV170046908
CDYZ01005289
258131
Bacillota
TGT
Thr
>WENV170047457
CDYZ01033999
258131
Bacillota
TGT
Thr
>WENV170047633
CDYZ01045531
258131
Bacillota
TGT
Thr
>WENV170047718
CDYZ01051340
258131
Bacillota
TGT
Thr
>WENV170047936
CDYZ01062827
258131
Bacillota
TGT
Thr
>WENV170047335
CDYZ01027695
162488
Bacillota
TCT
Arg
>WENV170047740
CDYZ01052352
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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