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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170047140
CDYZ01015840
158247
Bacillota
>WENV170047205
CDYZ01018840
37213
Bacillota
TGA
Ser
>WENV170046862
CDYZ01001875
59312
Bacillota
CAG
Leu
>WENV170046901
CDYZ01004967
59312
Bacillota
CAG
Leu
>WENV170047573
CDYZ01041035
59312
Bacillota
CAG
Leu
>WENV170047611
CDYZ01043732
235150
Bacillota
TGC
Ala
>WENV170047338
CDYZ01027695
235114
Bacillota
TTT
Lys
>WENV170046970
CDYZ01006930
44859
Bacillota
AAG
Leu
>WENV170047471
CDYZ01034782
44859
Bacillota
AAG
Leu
>WENV170046989
CDYZ01007974
173314
Bacillota
GAT
Ile
>WENV170047169
CDYZ01016984
152149
Bacillota
GTG
His
>WENV170047666
CDYZ01047149
153911
Bacillota
GAT
Ile
>WENV170047126
CDYZ01015214
100326
Bacillota
GTA
Tyr
>WENV170047336
CDYZ01027695
144610
Bacillota
GTG
His
>WENV170047270
CDYZ01023059
263765
Bacillota
TAC
Val
>WENV170047954
CDYZ01063467
412387
Bacillota
GCA
Cys
>WENV170047788
CDYZ01055263
412387
Bacillota
GCA
Cys
>WENV170047624
CDYZ01045527
313104
Bacillota
TAC
Val
>WENV170047739
CDYZ01052344
256380
Bacillota
>WENV170047360
CDYZ01028879
163943
Bacillota
GTC
Asp
>WENV170047246
CDYZ01021004
163943
Bacillota
GTC
Asp
>WENV170047104
CDYZ01013872
163943
Bacillota
GTC
Asp
>WENV170046850
CDYZ01000917
298620
Bacillota
CAT
Met
>WENV170047968
CDYZ01064310
157838
Bacillota
GTC
Asp
>WENV170047283
CDYZ01023700
238974
Bacillota
GAA
Phe
>WENV170047200
CDYZ01018693
272992
Bacillota
CTT
Lys
>WENV170047761
CDYZ01054107
248965
Bacillota
GCC
Gly
>WENV170046988
CDYZ01007974
299139
Bacillota
TGC
Ala
>WENV170047895
CDYZ01061135
95563
Bacillota
GTA
Tyr
>WENV170048032
CDYZ01066970
389329
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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