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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170064740
CDZL01004393
235097
Bacteroidota
TTT
Lys
>WENV170064846
CDZL01006706
235097
Bacteroidota
TTT
Lys
>WENV170065130
CDZL01014875
235097
Bacteroidota
TTT
Lys
>WENV170065205
CDZL01017845
235097
Bacteroidota
TTT
Lys
>WENV170065276
CDZL01020131
235097
Bacteroidota
TTT
Lys
>WENV170064666
CDZL01001586
235102
Bacteroidota
CGT
Thr
>WENV170065081
CDZL01013353
235102
Bacteroidota
CGT
Thr
>WENV170064615
CDZL01000706
338155
Bacteroidota
CTC
Glu
>WENV170064939
CDZL01009684
339341
Bacteroidota
GGT
Thr
>WENV170064884
CDZL01007532
58715
Bacteroidota
GAG
Leu
>WENV170065306
CDZL01021229
58715
Bacteroidota
GAG
Leu
>WENV170064934
CDZL01009149
338486
Bacteroidota
CAT
Met
>WENV170065138
CDZL01015078
338486
Bacteroidota
CAT
Met
>WENV170065109
CDZL01014465
415410
Bacteroidota
TTG
Gln
>WENV170064928
CDZL01008943
415410
Bacteroidota
TTG
Gln
>WENV170064785
CDZL01005748
415410
Bacteroidota
TTG
Gln
>WENV170064649
CDZL01000912
411543
Bacteroidota
CTG
Gln
>WENV170065018
CDZL01011955
20893
Bacteroidota
GGA
Ser
>WENV170064749
CDZL01004593
237247
Bacteroidota
TTT
Lys
>WENV170065268
CDZL01019788
338124
Bacteroidota
CCG
Arg
>WENV170065326
CDZL01022413
238121
Bacteroidota
CTT
Lys
>WENV170065327
CDZL01022413
238121
Bacteroidota
CTT
Lys
>WENV170065259
CDZL01019288
126641
Bacteroidota
TAC
Val
>WENV170065208
CDZL01017851
338132
Bacteroidota
GCA
Cys
>WENV170065196
CDZL01017315
338132
Bacteroidota
GCA
Cys
>WENV170065135
CDZL01015030
338132
Bacteroidota
GCA
Cys
>WENV170065038
CDZL01011965
338132
Bacteroidota
GCA
Cys
>WENV170064766
CDZL01005218
338132
Bacteroidota
GCA
Cys
>WENV170064747
CDZL01004592
338132
Bacteroidota
GCA
Cys
>WENV170065318
CDZL01021869
193809
Bacteroidota
CAT
Met
>WENV170065317
CDZL01021869
193809
Bacteroidota
CAT
Met
>WENV170065188
CDZL01016948
193809
Bacteroidota
CAT
Met
>WENV170065368
CDZL01023430
301449
Bacteroidota
CGG
Pro
>WENV170065321
CDZL01021887
301449
Bacteroidota
CGG
Pro
>WENV170065144
CDZL01015426
301449
Bacteroidota
CGG
Pro
>WENV170065071
CDZL01013113
301449
Bacteroidota
CGG
Pro
>WENV170065052
CDZL01012480
301449
Bacteroidota
CGG
Pro
>WENV170065006
CDZL01011425
301449
Bacteroidota
CGG
Pro
>WENV170064809
CDZL01005975
144933
Bacteroidota
TCT
Arg
>WENV170064905
CDZL01008519
144656
Bacteroidota
GTG
His
>WENV170065231
CDZL01018354
235207
Bacteroidota
CAT
Met
>WENV170064860
CDZL01007144
235207
Bacteroidota
CAT
Met
>WENV170065257
CDZL01019101
144596
Bacteroidota
GGC
Ala
>WENV170065263
CDZL01019522
80607
Bacteroidota
GTA
Tyr
>WENV170065039
CDZL01011983
80607
Bacteroidota
GTA
Tyr
>WENV170065009
CDZL01011428
80607
Bacteroidota
GTA
Tyr
>WENV170065216
CDZL01018171
113604
Bacteroidota
>WENV170065213
CDZL01018171
113604
Bacteroidota
>WENV170064631
CDZL01000907
113604
Bacteroidota
>WENV170064628
CDZL01000907
113604
Bacteroidota
>WENV170064625
CDZL01000907
113604
Bacteroidota
>WENV170065314
CDZL01021709
80614
Bacteroidota
>WENV170065175
CDZL01016777
80614
Bacteroidota
>WENV170064865
CDZL01007150
80614
Bacteroidota
>WENV170065174
CDZL01016773
52358
Bacteroidota
TGA
Ser
>WENV170065004
CDZL01011424
52358
Bacteroidota
TGA
Ser
>WENV170065000
CDZL01011227
52358
Bacteroidota
TGA
Ser
>WENV170064999
CDZL01011227
52358
Bacteroidota
TGA
Ser
>WENV170065149
CDZL01015523
144590
Bacteroidota
GTT
Asn
>WENV170065148
CDZL01015523
144590
Bacteroidota
GTT
Asn
>WENV170065337
CDZL01022647
95559
Bacteroidota
TAG
Leu
>WENV170065232
CDZL01018366
419272
Bacteroidota
CTG
Gln
>WENV170064687
CDZL01002178
144655
Bacteroidota
GGC
Ala
>WENV170064863
CDZL01007148
95875
Bacteroidota
TAG
Leu
>WENV170064935
CDZL01009149
240012
Bacteroidota
CCC
Gly
>WENV170065344
CDZL01022860
44852
Bacteroidota
TAA
Leu
>WENV170064899
CDZL01007932
338165
Bacteroidota
GGT
Thr
>WENV170065001
CDZL01011227
19528
Bacteroidota
GGA
Ser
>WENV170065293
CDZL01020808
132360
Bacteroidota
GGG
Pro
>WENV170065249
CDZL01018904
132360
Bacteroidota
GGG
Pro
>WENV170064901
CDZL01008096
132360
Bacteroidota
GGG
Pro
>WENV170064739
CDZL01004393
132360
Bacteroidota
GGG
Pro
>WENV170065270
CDZL01019992
425638
Bacteroidota
CTG
Gln
>WENV170065036
CDZL01011957
425638
Bacteroidota
CTG
Gln
>WENV170065365
CDZL01023406
239647
Bacteroidota
TTT
Lys
>WENV170065315
CDZL01021709
185921
Bacteroidota
GTC
Asp
>WENV170064614
CDZL01000706
23696
Bacteroidota
GCT
Ser
>WENV170065166
CDZL01016329
16224
Bacteroidota
GGA
Ser
>WENV170065042
CDZL01012301
16224
Bacteroidota
GGA
Ser
>WENV170064953
CDZL01009940
16220
Bacteroidota
GGA
Ser
>WENV170064933
CDZL01009148
338125
Bacteroidota
CCT
Arg
>WENV170064786
CDZL01005748
338125
Bacteroidota
CCT
Arg
>WENV170064688
CDZL01002262
338125
Bacteroidota
CCT
Arg
>WENV170064778
CDZL01005576
235129
Bacteroidota
GCC
Gly
>WENV170064776
CDZL01005576
235129
Bacteroidota
GCC
Gly
>WENV170065288
CDZL01020521
235129
Bacteroidota
GCC
Gly
>WENV170065286
CDZL01020521
235129
Bacteroidota
GCC
Gly
>WENV170064882
CDZL01007532
235129
Bacteroidota
GCC
Gly
>WENV170064994
CDZL01011000
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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