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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170087645
CEAD01013672
196621
Bacillota
GTC
Asp
>WENV170087779
CEAD01020149
196621
Bacillota
GTC
Asp
>WENV170087998
CEAD01030744
196621
Bacillota
GTC
Asp
>WENV170088113
CEAD01035903
196621
Bacillota
GTC
Asp
>WENV170088141
CEAD01037078
196621
Bacillota
GTC
Asp
>WENV170087508
CEAD01006427
309417
Bacillota
GGC
Ala
>WENV170087721
CEAD01016873
309417
Bacillota
GGC
Ala
>WENV170087498
CEAD01005754
144612
Bacillota
TCT
Arg
>WENV170087615
CEAD01011569
144612
Bacillota
TCT
Arg
>WENV170087556
CEAD01008086
235098
Bacillota
GAC
Val
>WENV170087658
CEAD01014069
235098
Bacillota
GAC
Val
>WENV170087854
CEAD01023605
235098
Bacillota
GAC
Val
>WENV170087868
CEAD01024734
235098
Bacillota
GAC
Val
>WENV170088191
CEAD01038660
235098
Bacillota
GAC
Val
>WENV170087395
CEAD01001305
338152
Bacillota
TTC
Glu
>WENV170087596
CEAD01010532
44854
Bacillota
TGA
Ser
>WENV170087829
CEAD01022466
44854
Bacillota
TGA
Ser
>WENV170087900
CEAD01025919
44854
Bacillota
TGA
Ser
>WENV170087553
CEAD01008025
144577
Bacillota
GAT
Ile
>WENV170088189
CEAD01038659
304022
Bacillota
GCC
Gly
>WENV170088115
CEAD01035903
304022
Bacillota
GCC
Gly
>WENV170087999
CEAD01030744
304022
Bacillota
GCC
Gly
>WENV170087758
CEAD01019410
304022
Bacillota
GCC
Gly
>WENV170087730
CEAD01018142
235150
Bacillota
TGC
Ala
>WENV170088066
CEAD01033583
429429
Bacillota
CCA
Trp
>WENV170087980
CEAD01029777
11034
Bacillota
GGA
Ser
>WENV170087955
CEAD01028873
11034
Bacillota
GGA
Ser
>WENV170087430
CEAD01003493
11034
Bacillota
GGA
Ser
>WENV170088114
CEAD01035903
235079
Bacillota
GAA
Phe
>WENV170087552
CEAD01008025
235087
Bacillota
TGC
Ala
>WENV170088077
CEAD01034352
338149
Bacillota
CTC
Glu
>WENV170088036
CEAD01032349
338149
Bacillota
CTC
Glu
>WENV170087769
CEAD01019923
338149
Bacillota
CTC
Glu
>WENV170087497
CEAD01005543
338149
Bacillota
CTC
Glu
>WENV170087965
CEAD01029051
245298
Bacillota
CGG
Pro
>WENV170087377
CEAD01000350
245298
Bacillota
CGG
Pro
>WENV170087740
CEAD01018471
287000
Bacillota
GTT
Asn
>WENV170087763
CEAD01019644
413152
Bacillota
TCC
Gly
>WENV170087445
CEAD01003864
201704
Bacillota
GAT
Ile
>WENV170087988
CEAD01030075
411547
Bacillota
CTG
Gln
>WENV170087964
CEAD01029051
411547
Bacillota
CTG
Gln
>WENV170087919
CEAD01026798
411547
Bacillota
CTG
Gln
>WENV170087575
CEAD01009465
411547
Bacillota
CTG
Gln
>WENV170087573
CEAD01009311
411547
Bacillota
CTG
Gln
>WENV170087376
CEAD01000350
411547
Bacillota
CTG
Gln
>WENV170087901
CEAD01025919
4624
Bacillota
GCT
Ser
>WENV170087674
CEAD01015310
4624
Bacillota
GCT
Ser
>WENV170088142
CEAD01037078
235095
Bacillota
GGT
Thr
>WENV170087883
CEAD01025121
235095
Bacillota
GGT
Thr
>WENV170087790
CEAD01020541
235095
Bacillota
GGT
Thr
>WENV170087782
CEAD01020259
235095
Bacillota
GGT
Thr
>WENV170087781
CEAD01020259
235095
Bacillota
GGT
Thr
>WENV170087780
CEAD01020149
235095
Bacillota
GGT
Thr
>WENV170087647
CEAD01013672
235095
Bacillota
GGT
Thr
>WENV170087646
CEAD01013672
235095
Bacillota
GGT
Thr
>WENV170087942
CEAD01028244
411549
Bacillota
TTG
Gln
>WENV170087941
CEAD01028225
411549
Bacillota
TTG
Gln
>WENV170087869
CEAD01024758
411549
Bacillota
TTG
Gln
>WENV170087547
CEAD01007849
411549
Bacillota
TTG
Gln
>WENV170087450
CEAD01003925
245386
Bacillota
CCA
Trp
>WENV170088001
CEAD01030744
80612
Bacillota
GTA
Tyr
>WENV170087390
CEAD01001261
80612
Bacillota
GTA
Tyr
>WENV170088200
CEAD01039090
235124
Bacillota
TGG
Pro
>WENV170087724
CEAD01017569
235124
Bacillota
TGG
Pro
>WENV170087689
CEAD01015659
235124
Bacillota
TGG
Pro
>WENV170088024
CEAD01031671
338129
Bacillota
TGT
Thr
>WENV170087878
CEAD01024789
338129
Bacillota
TGT
Thr
>WENV170088021
CEAD01031382
144583
Bacillota
ACG
Arg
>WENV170087930
CEAD01027332
144583
Bacillota
ACG
Arg
>WENV170087617
CEAD01011572
144583
Bacillota
ACG
Arg
>WENV170087574
CEAD01009352
144583
Bacillota
ACG
Arg
>WENV170088140
CEAD01037078
235171
Bacillota
CCA
Trp
>WENV170087978
CEAD01029541
144621
Bacillota
GTT
Asn
>WENV170087939
CEAD01027754
144621
Bacillota
GTT
Asn
>WENV170087770
CEAD01019923
144621
Bacillota
GTT
Asn
>WENV170087456
CEAD01004144
144621
Bacillota
GTT
Asn
>WENV170087417
CEAD01002311
58712
Bacillota
CAG
Leu
>WENV170087415
CEAD01002301
58712
Bacillota
CAG
Leu
>WENV170088167
CEAD01037967
245296
Bacillota
CCC
Gly
>WENV170087659
CEAD01014192
245296
Bacillota
CCC
Gly
>WENV170088037
CEAD01032349
272992
Bacillota
CTT
Lys
>WENV170088029
CEAD01031837
344240
Bacillota
GCC
Gly
>WENV170087440
CEAD01003604
196632
Bacillota
GTC
Asp
>WENV170087718
CEAD01016666
144594
Bacillota
CAC
Val
>WENV170087652
CEAD01013795
144594
Bacillota
CAC
Val
>WENV170087559
CEAD01008789
144594
Bacillota
CAC
Val
>WENV170087864
CEAD01024460
338128
Bacillota
TTC
Glu
>WENV170087549
CEAD01007980
338128
Bacillota
TTC
Glu
>WENV170087398
CEAD01001333
338128
Bacillota
TTC
Glu
>WENV170088164
CEAD01037814
245344
Bacillota
GAA
Phe
>WENV170087441
CEAD01003604
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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