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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170094854
CEAI01010416
257966
Bacillota
CCA
Trp
>WENV170094711
CEAI01005739
371877
Bacillota
CTG
Gln
>WENV170094832
CEAI01009865
261394
Bacillota
CCG
Arg
>WENV170094678
CEAI01004790
162485
Bacillota
CAT
Met
>WENV170094595
CEAI01002382
257968
Bacillota
GCC
Gly
>WENV170095158
CEAI01020435
369774
Bacillota
GGT
Thr
>WENV170095107
CEAI01018745
269920
Bacillota
CGC
Ala
>WENV170094799
CEAI01008643
393129
Bacillota
CTC
Glu
>WENV170095282
CEAI01025097
159242
Bacillota
CCG
Arg
>WENV170094984
CEAI01014744
258854
Bacillota
TGC
Ala
>WENV170095263
CEAI01024465
161902
Bacillota
CAT
Met
>WENV170094695
CEAI01005472
257972
Bacillota
CGG
Pro
>WENV170094584
CEAI01001757
64854
Bacillota
TAA
Leu
>WENV170094686
CEAI01004991
124618
Bacillota
GAG
Leu
>WENV170094811
CEAI01009333
449103
Bacillota
GCA
Cys
>WENV170094544
CEAI01000356
448255
Bacillota
CTG
Gln
>WENV170095016
CEAI01015772
448255
Bacillota
CTG
Gln
>WENV170094668
CEAI01004524
159234
Bacillota
CAC
Val
>WENV170094924
CEAI01012412
159234
Bacillota
CAC
Val
>WENV170094971
CEAI01013995
159234
Bacillota
CAC
Val
>WENV170094843
CEAI01010222
171336
Bacillota
CCT
Arg
>WENV170094574
CEAI01001489
162688
Bacillota
GAT
Ile
>WENV170094846
CEAI01010238
159237
Bacillota
TCT
Arg
>WENV170094554
CEAI01000846
371263
Bacillota
TTG
Gln
>WENV170095017
CEAI01015795
158271
Bacillota
CCT
Arg
>WENV170094571
CEAI01001330
369393
Bacillota
TTC
Glu
>WENV170094964
CEAI01013610
64857
Bacillota
TAA
Leu
>WENV170095187
CEAI01021631
56553
Bacillota
CAG
Leu
>WENV170094814
CEAI01009481
159074
Bacillota
ACG
Arg
>WENV170095085
CEAI01018284
369390
Bacillota
TGT
Thr
>WENV170095204
CEAI01022632
369390
Bacillota
TGT
Thr
>WENV170095061
CEAI01017324
11993
Bacillota
GGA
Ser
>WENV170094793
CEAI01008432
369776
Bacillota
CTG
Gln
>WENV170094954
CEAI01013075
369275
Bacillota
CCG
Arg
>WENV170094549
CEAI01000526
448210
Bacillota
CTG
Gln
>WENV170095025
CEAI01016112
131055
Bacillota
TAG
Leu
>WENV170094816
CEAI01009511
49796
Bacillota
TGA
Ser
>WENV170095280
CEAI01025087
49796
Bacillota
TGA
Ser
>WENV170094992
CEAI01014796
450457
Bacillota
CTG
Gln
>WENV170095076
CEAI01017870
450457
Bacillota
CTG
Gln
>WENV170094809
CEAI01008985
159344
Bacillota
>WENV170094546
CEAI01000397
5393
Bacillota
GCT
Ser
>WENV170094817
CEAI01009511
5393
Bacillota
GCT
Ser
>WENV170095281
CEAI01025087
5393
Bacillota
GCT
Ser
>WENV170094641
CEAI01003801
448256
Bacillota
TTG
Gln
>WENV170094810
CEAI01009206
448256
Bacillota
TTG
Gln
>WENV170094850
CEAI01010324
167205
Bacillota
TAC
Val
>WENV170094716
CEAI01005739
296620
Bacillota
GAA
Phe
>WENV170095042
CEAI01016812
171332
Bacillota
CGG
Pro
>WENV170094548
CEAI01000427
449102
Bacillota
CCA
Trp
>WENV170095132
CEAI01019239
265901
Bacillota
TGT
Thr
>WENV170094694
CEAI01005470
257795
Bacillota
GCC
Gly
>WENV170095089
CEAI01018321
159236
Bacillota
GTT
Asn
>WENV170095173
CEAI01020941
159236
Bacillota
GTT
Asn
>WENV170095208
CEAI01022836
159236
Bacillota
GTT
Asn
>WENV170095220
CEAI01023244
159236
Bacillota
GTT
Asn
>WENV170094972
CEAI01014010
257976
Bacillota
CCC
Gly
>WENV170094728
CEAI01005866
276063
Bacillota
CTC
Glu
>WENV170095116
CEAI01018866
258131
Bacillota
TGT
Thr
>WENV170094726
CEAI01005849
369392
Bacillota
GCA
Cys
>WENV170095199
CEAI01022412
257965
Bacillota
TGG
Pro
>WENV170094834
CEAI01009913
64855
Bacillota
CAG
Leu
>WENV170094959
CEAI01013460
64855
Bacillota
CAG
Leu
>WENV170095060
CEAI01017192
64855
Bacillota
CAG
Leu
>WENV170095277
CEAI01024796
64855
Bacillota
CAG
Leu
>WENV170094847
CEAI01010238
159238
Bacillota
GTG
His
>WENV170094614
CEAI01003143
369391
Bacillota
TCC
Gly
>WENV170094904
CEAI01012040
369391
Bacillota
TCC
Gly
>WENV170094603
CEAI01002762
12159
Bacillota
GGA
Ser
>WENV170095117
CEAI01018888
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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