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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170097206
CEAL01016662
257966
Bacillota
CCA
Trp
>WENV170097055
CEAL01009071
283277
Bacillota
GTT
Asn
>WENV170097582
CEAL01036569
159235
Bacillota
GTC
Asp
>WENV170097008
CEAL01007399
159247
Bacillota
>WENV170097426
CEAL01028342
19350
Bacillota
GCT
Ser
>WENV170097239
CEAL01018454
160231
Bacillota
>WENV170097030
CEAL01008089
378043
Bacillota
>WENV170097558
CEAL01034506
68274
Bacillota
TAA
Leu
>WENV170097087
CEAL01010940
369774
Bacillota
GGT
Thr
>WENV170097342
CEAL01024080
182782
Bacillota
ACG
Arg
>WENV170097158
CEAL01014315
410090
Bacillota
GCC
Gly
>WENV170097204
CEAL01016263
410090
Bacillota
GCC
Gly
>WENV170097324
CEAL01023157
410090
Bacillota
GCC
Gly
>WENV170097609
CEAL01037800
258854
Bacillota
TGC
Ala
>WENV170097047
CEAL01008700
257972
Bacillota
CGG
Pro
>WENV170097166
CEAL01014682
64854
Bacillota
TAA
Leu
>WENV170096889
CEAL01001826
124618
Bacillota
GAG
Leu
>WENV170097082
CEAL01010587
448255
Bacillota
CTG
Gln
>WENV170096913
CEAL01002198
272758
Bacillota
GCC
Gly
>WENV170097349
CEAL01024622
162688
Bacillota
GAT
Ile
>WENV170097351
CEAL01024650
162688
Bacillota
GAT
Ile
>WENV170097574
CEAL01036039
322184
Bacillota
GTT
Asn
>WENV170097434
CEAL01028711
90522
Bacillota
CAG
Leu
>WENV170097568
CEAL01035490
90522
Bacillota
CAG
Leu
>WENV170096890
CEAL01001826
131005
Bacillota
TAG
Leu
>WENV170097447
CEAL01029748
369393
Bacillota
TTC
Glu
>WENV170097017
CEAL01007960
56553
Bacillota
CAG
Leu
>WENV170096866
CEAL01000134
369390
Bacillota
TGT
Thr
>WENV170097325
CEAL01023277
271703
Bacillota
GTG
His
>WENV170097196
CEAL01015946
11993
Bacillota
GGA
Ser
>WENV170096942
CEAL01003910
49796
Bacillota
TGA
Ser
>WENV170097571
CEAL01035638
162605
Bacillota
CCT
Arg
>WENV170097326
CEAL01023277
308738
Bacillota
TTG
Gln
>WENV170097312
CEAL01022219
448256
Bacillota
TTG
Gln
>WENV170097165
CEAL01014493
261310
Bacillota
CGT
Thr
>WENV170096911
CEAL01002198
172620
Bacillota
GTC
Asp
>WENV170097053
CEAL01009071
283213
Bacillota
CTT
Lys
>WENV170097195
CEAL01015938
234325
Bacillota
>WENV170097070
CEAL01009757
448339
Bacillota
GCA
Cys
>WENV170096998
CEAL01006911
159236
Bacillota
GTT
Asn
>WENV170097612
CEAL01037954
159236
Bacillota
GTT
Asn
>WENV170097094
CEAL01011261
257976
Bacillota
CCC
Gly
>WENV170097051
CEAL01008983
159239
Bacillota
CCT
Arg
>WENV170097201
CEAL01016110
64855
Bacillota
CAG
Leu
>WENV170097584
CEAL01036666
159238
Bacillota
GTG
His
>WENV170097144
CEAL01013605
172178
Bacillota
GGG
Pro
>WENV170097436
CEAL01028760
51347
Bacillota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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