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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170096902
CEAL01001883
235097
Bacteroidota
TTT
Lys
>WENV170097032
CEAL01008312
235097
Bacteroidota
TTT
Lys
>WENV170097316
CEAL01022616
235097
Bacteroidota
TTT
Lys
>WENV170097511
CEAL01033531
235097
Bacteroidota
TTT
Lys
>WENV170097092
CEAL01011213
95987
Bacteroidota
CAA
Leu
>WENV170097566
CEAL01035329
339412
Bacteroidota
GGT
Thr
>WENV170097409
CEAL01027751
235102
Bacteroidota
CGT
Thr
>WENV170097595
CEAL01037195
144657
Bacteroidota
CGG
Pro
>WENV170096865
CEAL01000130
243025
Bacteroidota
CAT
Met
>WENV170097397
CEAL01026927
243025
Bacteroidota
CAT
Met
>WENV170097154
CEAL01014123
97336
Bacteroidota
CAG
Leu
>WENV170097215
CEAL01017386
338155
Bacteroidota
CTC
Glu
>WENV170097169
CEAL01014806
338155
Bacteroidota
CTC
Glu
>WENV170097152
CEAL01014122
338155
Bacteroidota
CTC
Glu
>WENV170097327
CEAL01023447
126965
Bacteroidota
GGG
Pro
>WENV170097468
CEAL01030959
339341
Bacteroidota
GGT
Thr
>WENV170096956
CEAL01004029
58715
Bacteroidota
GAG
Leu
>WENV170097284
CEAL01020291
95618
Bacteroidota
TAG
Leu
>WENV170096971
CEAL01005203
338486
Bacteroidota
CAT
Met
>WENV170097403
CEAL01027387
136244
Bacteroidota
TAC
Val
>WENV170097305
CEAL01021676
136244
Bacteroidota
TAC
Val
>WENV170097393
CEAL01026617
411543
Bacteroidota
CTG
Gln
>WENV170097218
CEAL01017453
411543
Bacteroidota
CTG
Gln
>WENV170097501
CEAL01032896
59689
Bacteroidota
CAG
Leu
>WENV170097216
CEAL01017445
436206
Bacteroidota
TTG
Gln
>WENV170097188
CEAL01015328
436206
Bacteroidota
TTG
Gln
>WENV170097146
CEAL01013896
436206
Bacteroidota
TTG
Gln
>WENV170097112
CEAL01012164
436206
Bacteroidota
TTG
Gln
>WENV170096862
CEAL01000005
412479
Bacteroidota
TTG
Gln
>WENV170097244
CEAL01018532
353373
Bacteroidota
>WENV170097599
CEAL01037480
338124
Bacteroidota
CCG
Arg
>WENV170097099
CEAL01011564
238121
Bacteroidota
CTT
Lys
>WENV170097616
CEAL01038444
338132
Bacteroidota
GCA
Cys
>WENV170097334
CEAL01023670
338132
Bacteroidota
GCA
Cys
>WENV170097170
CEAL01014823
338132
Bacteroidota
GCA
Cys
>WENV170096879
CEAL01001010
193809
Bacteroidota
CAT
Met
>WENV170096878
CEAL01001010
193809
Bacteroidota
CAT
Met
>WENV170096860
CEAL01000005
37076
Bacteroidota
TAA
Leu
>WENV170097586
CEAL01036707
301449
Bacteroidota
CGG
Pro
>WENV170097063
CEAL01009374
301449
Bacteroidota
CGG
Pro
>WENV170097044
CEAL01008628
301449
Bacteroidota
CGG
Pro
>WENV170096898
CEAL01001880
301449
Bacteroidota
CGG
Pro
>WENV170097464
CEAL01030722
144933
Bacteroidota
TCT
Arg
>WENV170096980
CEAL01005681
144656
Bacteroidota
GTG
His
>WENV170097292
CEAL01020635
235207
Bacteroidota
CAT
Met
>WENV170097322
CEAL01023121
144596
Bacteroidota
GGC
Ala
>WENV170097178
CEAL01015121
144596
Bacteroidota
GGC
Ala
>WENV170097538
CEAL01034499
80607
Bacteroidota
GTA
Tyr
>WENV170096922
CEAL01002475
80607
Bacteroidota
GTA
Tyr
>WENV170096899
CEAL01001881
80607
Bacteroidota
GTA
Tyr
>WENV170097604
CEAL01037482
113604
Bacteroidota
>WENV170097601
CEAL01037482
113604
Bacteroidota
>WENV170097077
CEAL01009967
344769
Bacteroidota
CTC
Glu
>WENV170097076
CEAL01009967
344769
Bacteroidota
CTC
Glu
>WENV170096920
CEAL01002472
147148
Bacteroidota
CAT
Met
>WENV170096892
CEAL01001846
175704
Bacteroidota
TGC
Ala
>WENV170097543
CEAL01034499
144590
Bacteroidota
GTT
Asn
>WENV170097542
CEAL01034499
144590
Bacteroidota
GTT
Asn
>WENV170097541
CEAL01034499
144590
Bacteroidota
GTT
Asn
>WENV170097269
CEAL01019251
144590
Bacteroidota
GTT
Asn
>WENV170097268
CEAL01019251
144590
Bacteroidota
GTT
Asn
>WENV170097267
CEAL01019251
144590
Bacteroidota
GTT
Asn
>WENV170097097
CEAL01011558
95559
Bacteroidota
TAG
Leu
>WENV170097509
CEAL01033530
419272
Bacteroidota
CTG
Gln
>WENV170097404
CEAL01027479
419272
Bacteroidota
CTG
Gln
>WENV170096914
CEAL01002446
419272
Bacteroidota
CTG
Gln
>WENV170096877
CEAL01001008
144655
Bacteroidota
GGC
Ala
>WENV170097139
CEAL01013270
95875
Bacteroidota
TAG
Leu
>WENV170097510
CEAL01033531
139743
Bacteroidota
GGG
Pro
>WENV170097406
CEAL01027479
139743
Bacteroidota
GGG
Pro
>WENV170096916
CEAL01002446
139743
Bacteroidota
GGG
Pro
>WENV170097300
CEAL01021342
240012
Bacteroidota
CCC
Gly
>WENV170097266
CEAL01019249
44852
Bacteroidota
TAA
Leu
>WENV170097056
CEAL01009141
19528
Bacteroidota
GGA
Ser
>WENV170097251
CEAL01018537
196394
Bacteroidota
GTC
Asp
>WENV170097250
CEAL01018537
196394
Bacteroidota
GTC
Asp
>WENV170097130
CEAL01012787
425638
Bacteroidota
CTG
Gln
>WENV170097491
CEAL01032389
185921
Bacteroidota
GTC
Asp
>WENV170097126
CEAL01012773
185921
Bacteroidota
GTC
Asp
>WENV170097214
CEAL01017386
23696
Bacteroidota
GCT
Ser
>WENV170097168
CEAL01014806
23696
Bacteroidota
GCT
Ser
>WENV170097572
CEAL01035670
55270
Bacteroidota
TGA
Ser
>WENV170097442
CEAL01029361
55270
Bacteroidota
TGA
Ser
>WENV170097160
CEAL01014462
55270
Bacteroidota
TGA
Ser
>WENV170097110
CEAL01012160
55270
Bacteroidota
TGA
Ser
>WENV170096900
CEAL01001881
55270
Bacteroidota
TGA
Ser
>WENV170097221
CEAL01017464
16224
Bacteroidota
GGA
Ser
>WENV170097405
CEAL01027479
16220
Bacteroidota
GGA
Ser
>WENV170096915
CEAL01002446
16220
Bacteroidota
GGA
Ser
>WENV170097611
CEAL01037801
338125
Bacteroidota
CCT
Arg
>WENV170097534
CEAL01034496
338125
Bacteroidota
CCT
Arg
>WENV170096874
CEAL01000489
338125
Bacteroidota
CCT
Arg
>WENV170096941
CEAL01003770
235129
Bacteroidota
GCC
Gly
>WENV170097242
CEAL01018532
313363
Bacteroidota
GAA
Phe
>WENV170097207
CEAL01016806
313363
Bacteroidota
GAA
Phe
>WENV170097079
CEAL01010279
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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