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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170101960
CEAR01056057
235102
Bacteroidota
CGT
Thr
>WENV170101163
CEAR01022538
267954
Bacteroidota
GCC
Gly
>WENV170101164
CEAR01022538
267954
Bacteroidota
GCC
Gly
>WENV170101490
CEAR01034573
267954
Bacteroidota
GCC
Gly
>WENV170101994
CEAR01058088
267954
Bacteroidota
GCC
Gly
>WENV170101361
CEAR01030653
144657
Bacteroidota
CGG
Pro
>WENV170101033
CEAR01016664
243025
Bacteroidota
CAT
Met
>WENV170101113
CEAR01020813
243025
Bacteroidota
CAT
Met
>WENV170101708
CEAR01042706
243025
Bacteroidota
CAT
Met
>WENV170101927
CEAR01054353
339341
Bacteroidota
GGT
Thr
>WENV170100728
CEAR01002229
343138
Bacteroidota
CCT
Arg
>WENV170100950
CEAR01012008
58715
Bacteroidota
GAG
Leu
>WENV170101111
CEAR01020690
17323
Bacteroidota
GGA
Ser
>WENV170101972
CEAR01056719
338486
Bacteroidota
CAT
Met
>WENV170101182
CEAR01023015
338486
Bacteroidota
CAT
Met
>WENV170100844
CEAR01006812
338486
Bacteroidota
CAT
Met
>WENV170101292
CEAR01027653
415410
Bacteroidota
TTG
Gln
>WENV170101371
CEAR01030653
59689
Bacteroidota
CAG
Leu
>WENV170100949
CEAR01012008
59689
Bacteroidota
CAG
Leu
>WENV170101199
CEAR01023907
344692
Bacteroidota
GGT
Thr
>WENV170101168
CEAR01022576
353373
Bacteroidota
>WENV170101615
CEAR01039408
341950
Bacteroidota
>WENV170101651
CEAR01040796
338124
Bacteroidota
CCG
Arg
>WENV170101535
CEAR01036492
235203
Bacteroidota
TTT
Lys
>WENV170101181
CEAR01023015
235203
Bacteroidota
TTT
Lys
>WENV170101120
CEAR01020954
235203
Bacteroidota
TTT
Lys
>WENV170101124
CEAR01021161
238121
Bacteroidota
CTT
Lys
>WENV170101123
CEAR01021161
238121
Bacteroidota
CTT
Lys
>WENV170101122
CEAR01021161
238121
Bacteroidota
CTT
Lys
>WENV170101061
CEAR01017317
238121
Bacteroidota
CTT
Lys
>WENV170101060
CEAR01017317
238121
Bacteroidota
CTT
Lys
>WENV170101059
CEAR01017317
238121
Bacteroidota
CTT
Lys
>WENV170102022
CEAR01059441
338132
Bacteroidota
GCA
Cys
>WENV170101556
CEAR01037506
338132
Bacteroidota
GCA
Cys
>WENV170101125
CEAR01021161
45423
Bacteroidota
TGA
Ser
>WENV170101119
CEAR01020954
58714
Bacteroidota
CAA
Leu
>WENV170101422
CEAR01031655
251266
Bacteroidota
CTT
Lys
>WENV170101377
CEAR01030654
136207
Bacteroidota
TAC
Val
>WENV170101376
CEAR01030654
136207
Bacteroidota
TAC
Val
>WENV170101375
CEAR01030654
136207
Bacteroidota
TAC
Val
>WENV170101374
CEAR01030654
136207
Bacteroidota
TAC
Val
>WENV170101403
CEAR01031161
144659
Bacteroidota
GTG
His
>WENV170101402
CEAR01031161
144659
Bacteroidota
GTG
His
>WENV170101362
CEAR01030653
235180
Bacteroidota
CCA
Trp
>WENV170101926
CEAR01054353
80614
Bacteroidota
>WENV170101706
CEAR01042693
80614
Bacteroidota
>WENV170101399
CEAR01031161
80614
Bacteroidota
>WENV170100952
CEAR01012008
80614
Bacteroidota
>WENV170101265
CEAR01026651
52358
Bacteroidota
TGA
Ser
>WENV170101216
CEAR01024788
52358
Bacteroidota
TGA
Ser
>WENV170101857
CEAR01050671
154643
Bacteroidota
CAT
Met
>WENV170100931
CEAR01011518
154643
Bacteroidota
CAT
Met
>WENV170100870
CEAR01008204
154643
Bacteroidota
CAT
Met
>WENV170101474
CEAR01034018
144590
Bacteroidota
GTT
Asn
>WENV170101473
CEAR01034018
144590
Bacteroidota
GTT
Asn
>WENV170101472
CEAR01034018
144590
Bacteroidota
GTT
Asn
>WENV170101471
CEAR01034018
144590
Bacteroidota
GTT
Asn
>WENV170101794
CEAR01047583
95559
Bacteroidota
TAG
Leu
>WENV170100971
CEAR01012946
419272
Bacteroidota
CTG
Gln
>WENV170100727
CEAR01002229
338164
Bacteroidota
TTC
Glu
>WENV170100726
CEAR01002229
338164
Bacteroidota
TTC
Glu
>WENV170101118
CEAR01020954
95875
Bacteroidota
TAG
Leu
>WENV170100996
CEAR01014245
95875
Bacteroidota
TAG
Leu
>WENV170101448
CEAR01033094
240012
Bacteroidota
CCC
Gly
>WENV170101238
CEAR01025451
240012
Bacteroidota
CCC
Gly
>WENV170100824
CEAR01006257
147439
Bacteroidota
TCT
Arg
>WENV170101618
CEAR01039450
132360
Bacteroidota
GGG
Pro
>WENV170101523
CEAR01035574
132360
Bacteroidota
GGG
Pro
>WENV170101198
CEAR01023900
132360
Bacteroidota
GGG
Pro
>WENV170100725
CEAR01002223
425638
Bacteroidota
CTG
Gln
>WENV170101748
CEAR01045161
353927
Bacteroidota
TTC
Glu
>WENV170101747
CEAR01045161
353927
Bacteroidota
TTC
Glu
>WENV170100924
CEAR01011518
353927
Bacteroidota
TTC
Glu
>WENV170101406
CEAR01031168
185921
Bacteroidota
GTC
Asp
>WENV170101405
CEAR01031168
185921
Bacteroidota
GTC
Asp
>WENV170101313
CEAR01028633
185921
Bacteroidota
GTC
Asp
>WENV170101312
CEAR01028633
185921
Bacteroidota
GTC
Asp
>WENV170101311
CEAR01028633
185921
Bacteroidota
GTC
Asp
>WENV170101558
CEAR01037506
23696
Bacteroidota
GCT
Ser
>WENV170101039
CEAR01016758
414426
Bacteroidota
CTG
Gln
>WENV170101753
CEAR01045638
48914
Bacteroidota
TGA
Ser
>WENV170100901
CEAR01010575
16220
Bacteroidota
GGA
Ser
>WENV170101833
CEAR01049522
338125
Bacteroidota
CCT
Arg
>WENV170101627
CEAR01039838
235129
Bacteroidota
GCC
Gly
>WENV170101370
CEAR01030653
235129
Bacteroidota
GCC
Gly
>WENV170101368
CEAR01030653
235129
Bacteroidota
GCC
Gly
>WENV170100948
CEAR01012008
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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