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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170124801
CENP01009887
165001
Bacteroidota
GTT
Asn
>WENV170125356
CENP01042124
165001
Bacteroidota
GTT
Asn
>WENV170126243
CENP01100972
165001
Bacteroidota
GTT
Asn
>WENV170126759
CENP01148308
165001
Bacteroidota
GTT
Asn
>WENV170127211
CENP01194267
165001
Bacteroidota
GTT
Asn
>WENV170126627
CENP01134053
145315
Bacteroidota
CAT
Met
>WENV170126741
CENP01146854
237360
Bacteroidota
TTT
Lys
>WENV170126475
CENP01119705
99288
Bacteroidota
TAG
Leu
>WENV170127881
CENP01237446
172532
Bacteroidota
GTC
Asp
>WENV170128180
CENP01391227
338625
Bacteroidota
TTC
Glu
>WENV170126323
CENP01106663
236125
Bacteroidota
GAA
Phe
>WENV170125287
CENP01038378
236125
Bacteroidota
GAA
Phe
>WENV170126566
CENP01127396
127458
Bacteroidota
GAC
Val
>WENV170125417
CENP01045557
364423
Bacteroidota
GGT
Thr
>WENV170127149
CENP01189799
270933
Bacteroidota
CAT
Met
>WENV170126099
CENP01088979
270933
Bacteroidota
CAT
Met
>WENV170126056
CENP01086529
270933
Bacteroidota
CAT
Met
>WENV170126014
CENP01083311
270933
Bacteroidota
CAT
Met
>WENV170125782
CENP01067519
270933
Bacteroidota
CAT
Met
>WENV170125686
CENP01061610
270933
Bacteroidota
CAT
Met
>WENV170125487
CENP01049477
270933
Bacteroidota
CAT
Met
>WENV170125251
CENP01035704
414401
Bacteroidota
GCA
Cys
>WENV170126292
CENP01104513
60611
Bacteroidota
GCT
Ser
>WENV170126193
CENP01097648
60611
Bacteroidota
GCT
Ser
>WENV170126376
CENP01110871
96678
Bacteroidota
TAG
Leu
>WENV170126246
CENP01101261
96678
Bacteroidota
TAG
Leu
>WENV170125562
CENP01054405
37569
Bacteroidota
TAA
Leu
>WENV170127689
CENP01230783
60695
Bacteroidota
GCT
Ser
>WENV170126324
CENP01106669
60695
Bacteroidota
GCT
Ser
>WENV170126295
CENP01104697
60695
Bacteroidota
GCT
Ser
>WENV170124990
CENP01019993
60695
Bacteroidota
GCT
Ser
>WENV170125832
CENP01070698
127288
Bacteroidota
TGG
Pro
>WENV170127617
CENP01226427
127414
Bacteroidota
TGG
Pro
>WENV170125861
CENP01072263
127414
Bacteroidota
TGG
Pro
>WENV170125682
CENP01061301
127414
Bacteroidota
TGG
Pro
>WENV170125653
CENP01059613
127414
Bacteroidota
TGG
Pro
>WENV170125454
CENP01047347
127414
Bacteroidota
TGG
Pro
>WENV170125398
CENP01044569
127414
Bacteroidota
TGG
Pro
>WENV170125380
CENP01043026
127414
Bacteroidota
TGG
Pro
>WENV170125222
CENP01033618
127414
Bacteroidota
TGG
Pro
>WENV170125123
CENP01028703
127414
Bacteroidota
TGG
Pro
>WENV170125041
CENP01023204
127414
Bacteroidota
TGG
Pro
>WENV170126708
CENP01143724
238764
Bacteroidota
>WENV170125923
CENP01077376
242524
Bacteroidota
GCC
Gly
>WENV170126199
CENP01098039
190649
Bacteroidota
GTT
Asn
>WENV170126015
CENP01083389
190649
Bacteroidota
GTT
Asn
>WENV170125946
CENP01078228
190649
Bacteroidota
GTT
Asn
>WENV170126121
CENP01091451
44938
Bacteroidota
TGA
Ser
>WENV170125922
CENP01077354
44938
Bacteroidota
TGA
Ser
>WENV170125809
CENP01068873
44938
Bacteroidota
TGA
Ser
>WENV170125031
CENP01022535
44938
Bacteroidota
TGA
Ser
>WENV170126644
CENP01136187
44938
Bacteroidota
TGA
Ser
>WENV170126258
CENP01101955
44938
Bacteroidota
TGA
Ser
>WENV170126221
CENP01099747
17987
Bacteroidota
GGA
Ser
>WENV170125133
CENP01029152
17987
Bacteroidota
GGA
Ser
>WENV170125669
CENP01060653
17496
Bacteroidota
GGA
Ser
>WENV170125611
CENP01057372
17496
Bacteroidota
GGA
Ser
>WENV170125369
CENP01042599
17496
Bacteroidota
GGA
Ser
>WENV170125624
CENP01058210
80676
Bacteroidota
GTA
Tyr
>WENV170128154
CENP01371164
148135
Bacteroidota
GGG
Pro
>WENV170127951
CENP01238855
246641
Bacteroidota
GAA
Phe
>WENV170127917
CENP01238304
246641
Bacteroidota
GAA
Phe
>WENV170127275
CENP01199123
246641
Bacteroidota
GAA
Phe
>WENV170127215
CENP01194571
246641
Bacteroidota
GAA
Phe
>WENV170126614
CENP01132231
246641
Bacteroidota
GAA
Phe
>WENV170126530
CENP01124758
246641
Bacteroidota
GAA
Phe
>WENV170126217
CENP01099124
246641
Bacteroidota
GAA
Phe
>WENV170125893
CENP01074315
246641
Bacteroidota
GAA
Phe
>WENV170124942
CENP01017538
246641
Bacteroidota
GAA
Phe
>WENV170124763
CENP01006925
246641
Bacteroidota
GAA
Phe
>WENV170125615
CENP01057570
240684
Bacteroidota
TTT
Lys
>WENV170126434
CENP01116032
165044
Bacteroidota
GTG
His
>WENV170126148
CENP01093881
165044
Bacteroidota
GTG
His
>WENV170125175
CENP01031276
165044
Bacteroidota
GTG
His
>WENV170127519
CENP01217906
145555
Bacteroidota
GTC
Asp
>WENV170127194
CENP01192771
145555
Bacteroidota
GTC
Asp
>WENV170126374
CENP01110776
145555
Bacteroidota
GTC
Asp
>WENV170126307
CENP01106118
145555
Bacteroidota
GTC
Asp
>WENV170125878
CENP01073289
145555
Bacteroidota
GTC
Asp
>WENV170125317
CENP01040183
185921
Bacteroidota
GTC
Asp
>WENV170127980
CENP01239167
185921
Bacteroidota
GTC
Asp
>WENV170127810
CENP01235346
185921
Bacteroidota
GTC
Asp
>WENV170127447
CENP01213189
185921
Bacteroidota
GTC
Asp
>WENV170127298
CENP01200768
185921
Bacteroidota
GTC
Asp
>WENV170126480
CENP01120308
185921
Bacteroidota
GTC
Asp
>WENV170126354
CENP01109421
185921
Bacteroidota
GTC
Asp
>WENV170125699
CENP01062493
185921
Bacteroidota
GTC
Asp
>WENV170125188
CENP01032010
185921
Bacteroidota
GTC
Asp
>WENV170125066
CENP01025000
185921
Bacteroidota
GTC
Asp
>WENV170127104
CENP01184856
145507
Bacteroidota
TCT
Arg
>WENV170127656
CENP01229231
48382
Bacteroidota
TGA
Ser
>WENV170127429
CENP01211757
48382
Bacteroidota
TGA
Ser
>WENV170125051
CENP01023990
240620
Bacteroidota
GCC
Gly
>WENV170124935
CENP01016851
127449
Bacteroidota
TAC
Val
>WENV170127344
CENP01205491
48914
Bacteroidota
TGA
Ser
>WENV170127037
CENP01178114
152405
Bacteroidota
GTT
Asn
>WENV170126019
CENP01083657
152405
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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