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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
129 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170128095
CENP01328609
277731
Bacteroidota
>WENV170126601
CENP01130793
165596
Bacteroidota
GGC
Ala
>WENV170125222
CENP01033618
139500
Bacteroidota
TGG
Pro
>WENV170127615
CENP01226350
166497
Bacteroidota
>WENV170125226
CENP01033748
213847
Bacteroidota
GTT
Asn
>WENV170124935
CENP01016851
139505
Bacteroidota
TAC
Val
>WENV170125346
CENP01041504
139505
Bacteroidota
TAC
Val
>WENV170125509
CENP01050843
139505
Bacteroidota
TAC
Val
>WENV170125516
CENP01051308
139505
Bacteroidota
TAC
Val
>WENV170126270
CENP01103096
139505
Bacteroidota
TAC
Val
>WENV170126676
CENP01141210
139505
Bacteroidota
TAC
Val
>WENV170126958
CENP01170072
139505
Bacteroidota
TAC
Val
>WENV170127104
CENP01184856
220163
Bacteroidota
TCT
Arg
>WENV170127540
CENP01219228
64800
Bacteroidota
GAG
Leu
>WENV170125152
CENP01030091
116954
Bacteroidota
TAG
Leu
>WENV170125289
CENP01038379
116954
Bacteroidota
TAG
Leu
>WENV170124995
CENP01020187
106605
Bacteroidota
CAA
Leu
>WENV170126450
CENP01117021
50545
Bacteroidota
TAA
Leu
>WENV170127568
CENP01222188
50545
Bacteroidota
TAA
Leu
>WENV170126527
CENP01124571
139484
Bacteroidota
TAC
Val
>WENV170125679
CENP01061137
211884
Bacteroidota
TGC
Ala
>WENV170126151
CENP01093924
211884
Bacteroidota
TGC
Ala
>WENV170126205
CENP01098412
211884
Bacteroidota
TGC
Ala
>WENV170126229
CENP01100126
211884
Bacteroidota
TGC
Ala
>WENV170126297
CENP01104961
211884
Bacteroidota
TGC
Ala
>WENV170126463
CENP01118468
211884
Bacteroidota
TGC
Ala
>WENV170124707
CENP01003422
57357
Bacteroidota
TGA
Ser
>WENV170125031
CENP01022535
57357
Bacteroidota
TGA
Ser
>WENV170125199
CENP01032479
57357
Bacteroidota
TGA
Ser
>WENV170125809
CENP01068873
57357
Bacteroidota
TGA
Ser
>WENV170125922
CENP01077354
57357
Bacteroidota
TGA
Ser
>WENV170126121
CENP01091451
57357
Bacteroidota
TGA
Ser
>WENV170126258
CENP01101955
57357
Bacteroidota
TGA
Ser
>WENV170126644
CENP01136187
57357
Bacteroidota
TGA
Ser
>WENV170125583
CENP01055722
160349
Bacteroidota
GTG
His
>WENV170125836
CENP01070790
160349
Bacteroidota
GTG
His
>WENV170125707
CENP01062880
456030
Bacteroidota
CCA
Trp
>WENV170127344
CENP01205491
50342
Bacteroidota
TGA
Ser
>WENV170125624
CENP01058210
95721
Bacteroidota
GTA
Tyr
>WENV170125306
CENP01039766
201198
Bacteroidota
TGT
Thr
>WENV170127286
CENP01199440
263627
Bacteroidota
TTG
Gln
>WENV170127734
CENP01232354
263627
Bacteroidota
TTG
Gln
>WENV170125066
CENP01025000
177164
Bacteroidota
GTC
Asp
>WENV170125188
CENP01032010
177164
Bacteroidota
GTC
Asp
>WENV170125317
CENP01040183
177164
Bacteroidota
GTC
Asp
>WENV170125699
CENP01062493
177164
Bacteroidota
GTC
Asp
>WENV170126354
CENP01109421
177164
Bacteroidota
GTC
Asp
>WENV170126480
CENP01120308
177164
Bacteroidota
GTC
Asp
>WENV170127298
CENP01200768
177164
Bacteroidota
GTC
Asp
>WENV170127447
CENP01213189
177164
Bacteroidota
GTC
Asp
>WENV170127810
CENP01235346
177164
Bacteroidota
GTC
Asp
>WENV170127980
CENP01239167
177164
Bacteroidota
GTC
Asp
>WENV170125832
CENP01070698
138967
Bacteroidota
TGG
Pro
>WENV170125833
CENP01070698
160570
Bacteroidota
TCT
Arg
>WENV170127052
CENP01179554
188048
Bacteroidota
GGC
Ala
>WENV170126013
CENP01083283
119207
Bacteroidota
TAG
Leu
>WENV170126475
CENP01119705
119207
Bacteroidota
TAG
Leu
>WENV170126767
CENP01149106
119207
Bacteroidota
TAG
Leu
>WENV170127527
CENP01218255
119207
Bacteroidota
TAG
Leu
>WENV170125041
CENP01023204
144149
Bacteroidota
TGG
Pro
>WENV170125123
CENP01028703
144149
Bacteroidota
TGG
Pro
>WENV170125380
CENP01043026
144149
Bacteroidota
TGG
Pro
>WENV170125398
CENP01044569
144149
Bacteroidota
TGG
Pro
>WENV170125454
CENP01047347
144149
Bacteroidota
TGG
Pro
>WENV170125653
CENP01059613
144149
Bacteroidota
TGG
Pro
>WENV170125682
CENP01061301
144149
Bacteroidota
TGG
Pro
>WENV170125861
CENP01072263
144149
Bacteroidota
TGG
Pro
>WENV170124763
CENP01006925
321470
Bacteroidota
GAA
Phe
>WENV170124942
CENP01017538
321470
Bacteroidota
GAA
Phe
>WENV170125027
CENP01022233
321470
Bacteroidota
GAA
Phe
>WENV170125893
CENP01074315
321470
Bacteroidota
GAA
Phe
>WENV170126217
CENP01099124
321470
Bacteroidota
GAA
Phe
>WENV170126530
CENP01124758
321470
Bacteroidota
GAA
Phe
>WENV170126614
CENP01132231
321470
Bacteroidota
GAA
Phe
>WENV170127215
CENP01194571
321470
Bacteroidota
GAA
Phe
>WENV170127275
CENP01199123
321470
Bacteroidota
GAA
Phe
>WENV170127917
CENP01238304
321470
Bacteroidota
GAA
Phe
>WENV170127951
CENP01238855
321470
Bacteroidota
GAA
Phe
>WENV170127956
CENP01238893
321470
Bacteroidota
GAA
Phe
>WENV170125271
CENP01037477
307992
Bacteroidota
GAA
Phe
>WENV170127272
CENP01198722
371968
Bacteroidota
CCT
Arg
>WENV170126295
CENP01104697
71400
Bacteroidota
GCT
Ser
>WENV170126324
CENP01106669
71400
Bacteroidota
GCT
Ser
>WENV170127689
CENP01230783
71400
Bacteroidota
GCT
Ser
>WENV170125133
CENP01029152
24600
Bacteroidota
GGA
Ser
>WENV170126221
CENP01099747
24600
Bacteroidota
GGA
Ser
>WENV170125946
CENP01078228
168483
Bacteroidota
GTT
Asn
>WENV170126015
CENP01083389
168483
Bacteroidota
GTT
Asn
>WENV170126199
CENP01098039
168483
Bacteroidota
GTT
Asn
>WENV170127966
CENP01239085
152195
Bacteroidota
TAC
Val
>WENV170126136
CENP01093116
106261
Bacteroidota
TAG
Leu
>WENV170124723
CENP01004727
310118
Bacteroidota
CCA
Trp
>WENV170124814
CENP01010522
310118
Bacteroidota
CCA
Trp
>WENV170124864
CENP01012608
310118
Bacteroidota
CCA
Trp
>WENV170125224
CENP01033701
310118
Bacteroidota
CCA
Trp
>WENV170125426
CENP01045884
310118
Bacteroidota
CCA
Trp
>WENV170125463
CENP01047970
310118
Bacteroidota
CCA
Trp
>WENV170125478
CENP01048890
310118
Bacteroidota
CCA
Trp
>WENV170125738
CENP01064880
310118
Bacteroidota
CCA
Trp
>WENV170125823
CENP01070133
310118
Bacteroidota
CCA
Trp
>WENV170126016
CENP01083403
310118
Bacteroidota
CCA
Trp
>WENV170126298
CENP01105031
310118
Bacteroidota
CCA
Trp
>WENV170126806
CENP01152251
310118
Bacteroidota
CCA
Trp
>WENV170127410
CENP01210482
310118
Bacteroidota
CCA
Trp
>WENV170125369
CENP01042599
23145
Bacteroidota
GGA
Ser
>WENV170125611
CENP01057372
23145
Bacteroidota
GGA
Ser
>WENV170125669
CENP01060653
23145
Bacteroidota
GGA
Ser
>WENV170125105
CENP01027618
18750
Bacteroidota
GGA
Ser
>WENV170126095
CENP01088564
18750
Bacteroidota
GGA
Ser
>WENV170127242
CENP01196594
18750
Bacteroidota
GGA
Ser
>WENV170127881
CENP01237446
158985
Bacteroidota
GTC
Asp
>WENV170125287
CENP01038378
311172
Bacteroidota
GAA
Phe
>WENV170126323
CENP01106663
311172
Bacteroidota
GAA
Phe
>WENV170125686
CENP01061610
259964
Bacteroidota
>WENV170125782
CENP01067519
259964
Bacteroidota
>WENV170124666
CENP01000681
301008
Bacteroidota
TTG
Gln
>WENV170125370
CENP01042599
301008
Bacteroidota
TTG
Gln
>WENV170125670
CENP01060653
301008
Bacteroidota
TTG
Gln
>WENV170126090
CENP01088387
301008
Bacteroidota
TTG
Gln
>WENV170126429
CENP01115727
301008
Bacteroidota
TTG
Gln
>WENV170127010
CENP01175668
301008
Bacteroidota
TTG
Gln
>WENV170128154
CENP01371164
160572
Bacteroidota
GGG
Pro
>WENV170124990
CENP01019993
68352
Bacteroidota
GCT
Ser
>WENV170125282
CENP01038000
68352
Bacteroidota
GCT
Ser
>WENV170125327
CENP01040478
390361
Bacteroidota
CCT
Arg
>WENV170126566
CENP01127396
139231
Bacteroidota
GAC
Val
>WENV170125537
CENP01053004
60145
Bacteroidota
TGA
Ser
>WENV170126846
CENP01156394
60145
Bacteroidota
TGA
Ser
>WENV170126148
CENP01093881
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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