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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170130659
CENR01020953
146962
Bacteroidota
CAT
Met
>WENV170130820
CENR01030227
236929
Bacteroidota
TTT
Lys
>WENV170130474
CENR01000683
165001
Bacteroidota
GTT
Asn
>WENV170130816
CENR01030187
179080
Bacteroidota
CAT
Met
>WENV170130493
CENR01003162
150845
Bacteroidota
GTC
Asp
>WENV170130978
CENR01073767
430187
Bacteroidota
GCA
Cys
>WENV170130758
CENR01027926
309582
Bacteroidota
TTT
Lys
>WENV170130617
CENR01017374
60261
Bacteroidota
TAA
Leu
>WENV170130726
CENR01026000
172532
Bacteroidota
GTC
Asp
>WENV170130969
CENR01073439
81938
Bacteroidota
GAG
Leu
>WENV170130807
CENR01030067
338625
Bacteroidota
TTC
Glu
>WENV170130512
CENR01004975
338625
Bacteroidota
TTC
Glu
>WENV170130832
CENR01030344
127458
Bacteroidota
GAC
Val
>WENV170130974
CENR01073670
45519
Bacteroidota
GGA
Ser
>WENV170130638
CENR01018456
127414
Bacteroidota
TGG
Pro
>WENV170130772
CENR01028985
238764
Bacteroidota
>WENV170130535
CENR01007329
197066
Bacteroidota
GTT
Asn
>WENV170130814
CENR01030135
274593
Bacteroidota
TTG
Gln
>WENV170130645
CENR01019668
44938
Bacteroidota
TGA
Ser
>WENV170130524
CENR01005846
152147
Bacteroidota
TCT
Arg
>WENV170130685
CENR01023699
235802
Bacteroidota
CAT
Met
>WENV170130825
CENR01030279
152188
Bacteroidota
GGC
Ala
>WENV170130463
CENR01000157
152188
Bacteroidota
GGC
Ala
>WENV170130769
CENR01028864
97383
Bacteroidota
CAA
Leu
>WENV170130564
CENR01011314
193627
Bacteroidota
TCT
Arg
>WENV170130481
CENR01001295
150454
Bacteroidota
TGT
Thr
>WENV170130618
CENR01017409
255845
Bacteroidota
>WENV170130616
CENR01017374
255845
Bacteroidota
>WENV170130759
CENR01027926
60370
Bacteroidota
GAG
Leu
>WENV170130979
CENR01073784
45130
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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