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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170212430
CEPW01178038
387387
Cyanobacteriota
GAC
Val
>WENV170211309
CEPW01056760
373624
Cyanobacteriota
TTG
Gln
>WENV170212398
CEPW01176113
373624
Cyanobacteriota
TTG
Gln
>WENV170210594
CEPW01000639
236930
Cyanobacteriota
CGC
Ala
>WENV170211562
CEPW01084392
236930
Cyanobacteriota
CGC
Ala
>WENV170211747
CEPW01103572
267489
Cyanobacteriota
GGC
Ala
>WENV170211015
CEPW01031394
306125
Cyanobacteriota
GTG
His
>WENV170211114
CEPW01040772
339686
Cyanobacteriota
TAC
Val
>WENV170211658
CEPW01094441
96363
Cyanobacteriota
TAG
Leu
>WENV170211170
CEPW01045422
25356
Cyanobacteriota
GGA
Ser
>WENV170211999
CEPW01132877
349164
Cyanobacteriota
TGT
Thr
>WENV170211197
CEPW01047221
349164
Cyanobacteriota
TGT
Thr
>WENV170211187
CEPW01046690
349164
Cyanobacteriota
TGT
Thr
>WENV170212875
CEPW01309979
338782
Cyanobacteriota
GTT
Asn
>WENV170211417
CEPW01067522
23668
Cyanobacteriota
TGA
Ser
>WENV170211792
CEPW01108738
344607
Cyanobacteriota
CCC
Gly
>WENV170211133
CEPW01042644
344607
Cyanobacteriota
CCC
Gly
>WENV170210733
CEPW01009680
344607
Cyanobacteriota
CCC
Gly
>WENV170211057
CEPW01034896
58999
Cyanobacteriota
CAG
Leu
>WENV170212099
CEPW01145293
190971
Cyanobacteriota
GTC
Asp
>WENV170211014
CEPW01031394
80908
Cyanobacteriota
CAA
Leu
>WENV170211266
CEPW01053332
11030
Cyanobacteriota
GCT
Ser
>WENV170212347
CEPW01172005
95762
Cyanobacteriota
AAG
Leu
>WENV170212830
CEPW01302808
267488
Cyanobacteriota
CAT
Met
>WENV170212129
CEPW01148707
275577
Cyanobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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