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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170220572
CEPZ01182928
144980
Gammaproteobacteria
CCG
Arg
>WENV170218371
CEPZ01003889
165036
Gammaproteobacteria
CCA
Trp
>WENV170218395
CEPZ01004963
149065
Gammaproteobacteria
CCA
Trp
>WENV170219802
CEPZ01082595
147048
Gammaproteobacteria
CCA
Trp
>WENV170219904
CEPZ01085707
147048
Gammaproteobacteria
CCA
Trp
>WENV170219275
CEPZ01053546
417812
Gammaproteobacteria
GCA
Cys
>WENV170218825
CEPZ01024508
58767
Gammaproteobacteria
CAG
Leu
>WENV170220331
CEPZ01145228
149066
Gammaproteobacteria
CAT
Met
>WENV170218865
CEPZ01026394
249887
Gammaproteobacteria
GGT
Thr
>WENV170219211
CEPZ01049126
268606
Gammaproteobacteria
TGT
Thr
>WENV170219809
CEPZ01083238
269248
Gammaproteobacteria
CCA
Trp
>WENV170218905
CEPZ01028368
23732
Gammaproteobacteria
GGA
Ser
>WENV170220031
CEPZ01087964
149073
Gammaproteobacteria
CAT
Met
>WENV170220467
CEPZ01170100
237221
Gammaproteobacteria
GGC
Ala
>WENV170218607
CEPZ01014886
162284
Gammaproteobacteria
CCA
Trp
>WENV170218680
CEPZ01017489
241230
Gammaproteobacteria
GAA
Phe
>WENV170219952
CEPZ01086526
339596
Gammaproteobacteria
CCT
Arg
>WENV170218423
CEPZ01006127
269152
Gammaproteobacteria
GTG
His
>WENV170218451
CEPZ01007577
237708
Gammaproteobacteria
GCC
Gly
>WENV170219311
CEPZ01055322
96103
Gammaproteobacteria
CAA
Leu
>WENV170220282
CEPZ01133344
411842
Gammaproteobacteria
GCA
Cys
>WENV170218824
CEPZ01024508
65265
Gammaproteobacteria
CAG
Leu
>WENV170219186
CEPZ01047079
262546
Gammaproteobacteria
TGC
Ala
>WENV170220136
CEPZ01090563
45411
Gammaproteobacteria
GGA
Ser
>WENV170219493
CEPZ01067802
45411
Gammaproteobacteria
GGA
Ser
>WENV170219463
CEPZ01065647
16460
Gammaproteobacteria
TGA
Ser
>WENV170218315
CEPZ01001597
16460
Gammaproteobacteria
TGA
Ser
>WENV170220281
CEPZ01133344
270352
Gammaproteobacteria
GCC
Gly
>WENV170218629
CEPZ01015485
173617
Gammaproteobacteria
GTC
Asp
>WENV170219670
CEPZ01075472
179150
Gammaproteobacteria
CAT
Met
>WENV170219400
CEPZ01061726
179150
Gammaproteobacteria
CAT
Met
>WENV170219146
CEPZ01044688
179150
Gammaproteobacteria
CAT
Met
>WENV170218331
CEPZ01002428
179150
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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