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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170232028
CEQI01016216
149985
Alphaproteobacteria
ACG
Arg
>WENV170232423
CEQI01058231
149985
Alphaproteobacteria
ACG
Arg
>WENV170232533
CEQI01070207
241021
Alphaproteobacteria
GGC
Ala
>WENV170232621
CEQI01083782
368245
Alphaproteobacteria
>WENV170232602
CEQI01081064
236134
Alphaproteobacteria
TAC
Val
>WENV170231928
CEQI01006591
339722
Alphaproteobacteria
TTG
Gln
>WENV170232556
CEQI01073100
281594
Alphaproteobacteria
TGT
Thr
>WENV170232963
CEQI01173106
243803
Alphaproteobacteria
CAT
Met
>WENV170232385
CEQI01055272
283763
Alphaproteobacteria
TGC
Ala
>WENV170232412
CEQI01057915
258175
Alphaproteobacteria
CGC
Ala
>WENV170233073
CEQI01207998
339305
Alphaproteobacteria
GGT
Thr
>WENV170232355
CEQI01053063
237281
Alphaproteobacteria
CGT
Thr
>WENV170231847
CEQI01000604
242540
Alphaproteobacteria
TGC
Ala
>WENV170231931
CEQI01006731
280207
Alphaproteobacteria
TGC
Ala
>WENV170232655
CEQI01086761
338622
Alphaproteobacteria
GTT
Asn
>WENV170232482
CEQI01064015
279830
Alphaproteobacteria
TAC
Val
>WENV170232095
CEQI01023505
266073
Alphaproteobacteria
TTT
Lys
>WENV170232014
CEQI01014118
266073
Alphaproteobacteria
TTT
Lys
>WENV170232720
CEQI01093897
339639
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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