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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170242816
CEQO01087591
338634
Gammaproteobacteria
GCC
Gly
>WENV170242319
CEQO01047143
98124
Gammaproteobacteria
GAG
Leu
>WENV170242844
CEQO01090481
98124
Gammaproteobacteria
GAG
Leu
>WENV170241822
CEQO01012082
236030
Gammaproteobacteria
CCA
Trp
>WENV170243487
CEQO01155718
145492
Gammaproteobacteria
CCG
Arg
>WENV170243227
CEQO01133700
236480
Gammaproteobacteria
GTG
His
>WENV170242508
CEQO01062271
171935
Gammaproteobacteria
ACG
Arg
>WENV170243526
CEQO01157805
16453
Gammaproteobacteria
TGA
Ser
>WENV170243503
CEQO01156446
236027
Gammaproteobacteria
GTT
Asn
>WENV170242172
CEQO01035515
236027
Gammaproteobacteria
GTT
Asn
>WENV170241902
CEQO01016313
411767
Gammaproteobacteria
TCC
Gly
>WENV170243228
CEQO01133700
97031
Gammaproteobacteria
TAG
Leu
>WENV170243272
CEQO01136926
236028
Gammaproteobacteria
TTT
Lys
>WENV170242507
CEQO01062271
23442
Gammaproteobacteria
GCT
Ser
>WENV170241903
CEQO01016313
377665
Gammaproteobacteria
GGT
Thr
>WENV170243687
CEQO01180517
250885
Gammaproteobacteria
TGC
Ala
>WENV170243087
CEQO01118650
145491
Gammaproteobacteria
GGG
Pro
>WENV170241900
CEQO01016313
236033
Gammaproteobacteria
TGT
Thr
>WENV170243847
CEQO01239545
243485
Gammaproteobacteria
TGT
Thr
>WENV170243630
CEQO01163233
236034
Gammaproteobacteria
CCT
Arg
>WENV170243987
CEQO01276730
266766
Gammaproteobacteria
TGT
Thr
>WENV170242997
CEQO01105767
236031
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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