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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170362491
CETM01075696
159182
Gammaproteobacteria
GGG
Pro
>WENV170363982
CETM01197697
257895
Gammaproteobacteria
TTT
Lys
>WENV170363096
CETM01126038
174334
Gammaproteobacteria
>WENV170361532
CETM01012410
65310
Gammaproteobacteria
CAG
Leu
>WENV170363088
CETM01125471
18367
Gammaproteobacteria
GCT
Ser
>WENV170361997
CETM01040717
451765
Gammaproteobacteria
GCA
Cys
>WENV170361447
CETM01008608
191632
Gammaproteobacteria
>WENV170361348
CETM01003410
49893
Gammaproteobacteria
GGA
Ser
>WENV170364412
CETM01266949
261853
Gammaproteobacteria
GTT
Asn
>WENV170364957
CETM01456837
261853
Gammaproteobacteria
GTT
Asn
>WENV170361945
CETM01036432
65311
Gammaproteobacteria
TAA
Leu
>WENV170361954
CETM01037278
270870
Gammaproteobacteria
GAA
Phe
>WENV170361725
CETM01024789
257883
Gammaproteobacteria
TGT
Thr
>WENV170362089
CETM01045028
105559
Gammaproteobacteria
GAG
Leu
>WENV170362434
CETM01071241
370375
Gammaproteobacteria
CCT
Arg
>WENV170362014
CETM01041877
8977
Gammaproteobacteria
GCT
Ser
>WENV170361897
CETM01033696
160859
Gammaproteobacteria
GGG
Pro
>WENV170364083
CETM01201452
65736
Gammaproteobacteria
TAA
Leu
>WENV170364188
CETM01203907
65736
Gammaproteobacteria
TAA
Leu
>WENV170362719
CETM01095536
160858
Gammaproteobacteria
CCA
Trp
>WENV170361773
CETM01027326
159174
Gammaproteobacteria
TGG
Pro
>WENV170361922
CETM01035704
159174
Gammaproteobacteria
TGG
Pro
>WENV170362015
CETM01041877
188066
Gammaproteobacteria
ACG
Arg
>WENV170362016
CETM01041877
188066
Gammaproteobacteria
ACG
Arg
>WENV170361678
CETM01022051
369341
Gammaproteobacteria
CCG
Arg
>WENV170363589
CETM01171594
271191
Gammaproteobacteria
CCA
Trp
>WENV170363247
CETM01141473
158349
Gammaproteobacteria
>WENV170363261
CETM01143438
451853
Gammaproteobacteria
GCA
Cys
>WENV170361923
CETM01035704
171913
Gammaproteobacteria
TCT
Arg
>WENV170362223
CETM01056378
172986
Gammaproteobacteria
CCA
Trp
>WENV170362428
CETM01070863
263086
Gammaproteobacteria
GTT
Asn
>WENV170363720
CETM01183118
259747
Gammaproteobacteria
TGT
Thr
>WENV170363624
CETM01175305
256945
Gammaproteobacteria
GAA
Phe
>WENV170361866
CETM01031289
181298
Gammaproteobacteria
>WENV170364674
CETM01387996
106574
Gammaproteobacteria
TAG
Leu
>WENV170364699
CETM01395994
259140
Gammaproteobacteria
TGC
Ala
>WENV170361795
CETM01028070
278750
Gammaproteobacteria
GCC
Gly
>WENV170361774
CETM01027326
161321
Gammaproteobacteria
TCT
Arg
>WENV170362528
CETM01078118
272258
Gammaproteobacteria
GGC
Ala
>WENV170363214
CETM01137665
272258
Gammaproteobacteria
GGC
Ala
>WENV170362081
CETM01044273
105274
Gammaproteobacteria
TAG
Leu
>WENV170363454
CETM01161816
284995
Gammaproteobacteria
GTG
His
>WENV170364815
CETM01439768
381719
Gammaproteobacteria
CCT
Arg
>WENV170361319
CETM01002072
301409
Gammaproteobacteria
TGC
Ala
>WENV170363374
CETM01154397
290512
Gammaproteobacteria
TGT
Thr
>WENV170363497
CETM01164866
67081
Gammaproteobacteria
CAA
Leu
>WENV170363365
CETM01153409
160116
Gammaproteobacteria
GAC
Val
>WENV170363466
CETM01162601
160116
Gammaproteobacteria
GAC
Val
>WENV170361818
CETM01029626
105812
Gammaproteobacteria
GTA
Tyr
>WENV170363305
CETM01148828
105812
Gammaproteobacteria
GTA
Tyr
>WENV170363446
CETM01161037
105812
Gammaproteobacteria
GTA
Tyr
>WENV170363404
CETM01156925
26256
Gammaproteobacteria
CGA
Ser
>WENV170363018
CETM01119372
280351
Gammaproteobacteria
TTT
Lys
>WENV170361749
CETM01026007
89004
Gammaproteobacteria
GAG
Leu
>WENV170361820
CETM01029743
161319
Gammaproteobacteria
>WENV170361956
CETM01037278
258349
Gammaproteobacteria
TGT
Thr
>WENV170364119
CETM01202473
265381
Gammaproteobacteria
GTT
Asn
>WENV170364143
CETM01203236
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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