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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170361795
CETM01028070
235449
Gammaproteobacteria
>WENV170362089
CETM01045028
95975
Gammaproteobacteria
GAG
Leu
>WENV170362528
CETM01078118
313881
Gammaproteobacteria
GGC
Ala
>WENV170363214
CETM01137665
313881
Gammaproteobacteria
GGC
Ala
>WENV170362719
CETM01095536
147048
Gammaproteobacteria
CCA
Trp
>WENV170361629
CETM01019507
163492
Gammaproteobacteria
TGG
Pro
>WENV170361820
CETM01029743
147779
Gammaproteobacteria
CAT
Met
>WENV170363982
CETM01197697
244202
Gammaproteobacteria
TTT
Lys
>WENV170361484
CETM01010891
61925
Gammaproteobacteria
TAA
Leu
>WENV170363818
CETM01190079
47425
Gammaproteobacteria
GGA
Ser
>WENV170361308
CETM01001166
47425
Gammaproteobacteria
GGA
Ser
>WENV170362223
CETM01056378
149036
Gammaproteobacteria
CCA
Trp
>WENV170362491
CETM01075696
147778
Gammaproteobacteria
GGG
Pro
>WENV170363247
CETM01141473
149073
Gammaproteobacteria
CAT
Met
>WENV170361923
CETM01035704
164116
Gammaproteobacteria
TCT
Arg
>WENV170361294
CETM01000430
241230
Gammaproteobacteria
GAA
Phe
>WENV170364815
CETM01439768
339596
Gammaproteobacteria
CCT
Arg
>WENV170362434
CETM01071241
339596
Gammaproteobacteria
CCT
Arg
>WENV170361774
CETM01027326
147777
Gammaproteobacteria
TCT
Arg
>WENV170361372
CETM01004265
243902
Gammaproteobacteria
GTT
Asn
>WENV170361371
CETM01004265
243902
Gammaproteobacteria
GTT
Asn
>WENV170361370
CETM01004265
243902
Gammaproteobacteria
GTT
Asn
>WENV170361922
CETM01035704
147055
Gammaproteobacteria
TGG
Pro
>WENV170361773
CETM01027326
147055
Gammaproteobacteria
TGG
Pro
>WENV170361447
CETM01008608
158933
Gammaproteobacteria
CAT
Met
>WENV170362399
CETM01069036
412476
Gammaproteobacteria
TCC
Gly
>WENV170361313
CETM01001837
147118
Gammaproteobacteria
GAC
Val
>WENV170362398
CETM01069036
113870
Gammaproteobacteria
GTA
Tyr
>WENV170363216
CETM01137955
145713
Gammaproteobacteria
CAT
Met
>WENV170361997
CETM01040717
412373
Gammaproteobacteria
GCA
Cys
>WENV170361866
CETM01031289
151889
Gammaproteobacteria
CAT
Met
>WENV170361951
CETM01036897
128930
Gammaproteobacteria
GTC
Asp
>WENV170361945
CETM01036432
59415
Gammaproteobacteria
TAA
Leu
>WENV170361678
CETM01022051
343529
Gammaproteobacteria
CCG
Arg
>WENV170363629
CETM01175750
149037
Gammaproteobacteria
GAC
Val
>WENV170362249
CETM01057578
149037
Gammaproteobacteria
GAC
Val
>WENV170361954
CETM01037278
251608
Gammaproteobacteria
GAA
Phe
>WENV170363466
CETM01162601
163580
Gammaproteobacteria
GAC
Val
>WENV170363365
CETM01153409
163580
Gammaproteobacteria
GAC
Val
>WENV170361348
CETM01003410
45152
Gammaproteobacteria
GGA
Ser
>WENV170361897
CETM01033696
147049
Gammaproteobacteria
GGG
Pro
>WENV170361647
CETM01020775
10850
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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