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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170365002
CETN01003907
158433
Gammaproteobacteria
ACG
Arg
>WENV170365461
CETN01077720
198668
Gammaproteobacteria
>WENV170365539
CETN01096759
65192
Gammaproteobacteria
CAG
Leu
>WENV170364994
CETN01002536
8977
Gammaproteobacteria
GCT
Ser
>WENV170365699
CETN01152679
161428
Gammaproteobacteria
CAT
Met
>WENV170365673
CETN01147228
49699
Gammaproteobacteria
TGA
Ser
>WENV170365060
CETN01009461
126541
Gammaproteobacteria
GTA
Tyr
>WENV170365011
CETN01004272
262291
Gammaproteobacteria
TTC
Glu
>WENV170365049
CETN01007258
262291
Gammaproteobacteria
TTC
Glu
>WENV170365617
CETN01128736
81738
Gammaproteobacteria
TAA
Leu
>WENV170365635
CETN01134380
26187
Gammaproteobacteria
GGA
Ser
>WENV170365066
CETN01009486
162062
Gammaproteobacteria
TCT
Arg
>WENV170365448
CETN01076144
399907
Gammaproteobacteria
TTG
Gln
>WENV170365109
CETN01016668
225112
Gammaproteobacteria
GAT
Ile
>WENV170365680
CETN01148069
65858
Gammaproteobacteria
CAA
Leu
>WENV170365022
CETN01005385
271866
Gammaproteobacteria
TTT
Lys
>WENV170365005
CETN01003935
479393
Gammaproteobacteria
GCA
Cys
>WENV170364998
CETN01002990
370629
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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