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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170432314
CEUS01082105
183605
Gammaproteobacteria
CCG
Arg
>WENV170433345
CEUS01167735
113631
Gammaproteobacteria
GTA
Tyr
>WENV170432042
CEUS01065181
149035
Gammaproteobacteria
CCG
Arg
>WENV170431295
CEUS01029520
160030
Gammaproteobacteria
GGG
Pro
>WENV170432261
CEUS01079202
160030
Gammaproteobacteria
GGG
Pro
>WENV170435110
CEUS01308337
171935
Gammaproteobacteria
ACG
Arg
>WENV170433693
CEUS01201254
269248
Gammaproteobacteria
CCA
Trp
>WENV170430902
CEUS01011755
185163
Gammaproteobacteria
ACG
Arg
>WENV170434487
CEUS01262798
235452
Gammaproteobacteria
GAA
Phe
>WENV170434486
CEUS01262793
235452
Gammaproteobacteria
GAA
Phe
>WENV170433346
CEUS01167735
338534
Gammaproteobacteria
TCC
Gly
>WENV170433631
CEUS01194865
412799
Gammaproteobacteria
GCA
Cys
>WENV170430798
CEUS01005909
340801
Gammaproteobacteria
CCT
Arg
>WENV170432890
CEUS01129186
175987
Gammaproteobacteria
CGG
Pro
>WENV170431329
CEUS01030916
278046
Gammaproteobacteria
TGT
Thr
>WENV170434509
CEUS01264914
59830
Gammaproteobacteria
CAA
Leu
>WENV170433216
CEUS01156076
425813
Gammaproteobacteria
GCA
Cys
>WENV170431956
CEUS01060861
151889
Gammaproteobacteria
CAT
Met
>WENV170435013
CEUS01284315
149037
Gammaproteobacteria
GAC
Val
>WENV170431210
CEUS01025639
149037
Gammaproteobacteria
GAC
Val
>WENV170434381
CEUS01257102
179790
Gammaproteobacteria
CAT
Met
>WENV170431814
CEUS01054241
45411
Gammaproteobacteria
GGA
Ser
>WENV170433456
CEUS01177627
277196
Gammaproteobacteria
GAA
Phe
>WENV170431736
CEUS01050305
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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