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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170442714
CEUW01062866
413342
Bacteroidota
TTC
Glu
>WENV170442958
CEUW01086995
165596
Bacteroidota
GGC
Ala
>WENV170442035
CEUW01005240
139500
Bacteroidota
TGG
Pro
>WENV170442192
CEUW01017334
139500
Bacteroidota
TGG
Pro
>WENV170442680
CEUW01059596
265680
Bacteroidota
>WENV170442011
CEUW01003209
116954
Bacteroidota
TAG
Leu
>WENV170443047
CEUW01093346
139484
Bacteroidota
TAC
Val
>WENV170442702
CEUW01061220
57357
Bacteroidota
TGA
Ser
>WENV170442572
CEUW01048382
50342
Bacteroidota
TGA
Ser
>WENV170442992
CEUW01089919
50342
Bacteroidota
TGA
Ser
>WENV170442122
CEUW01012480
263627
Bacteroidota
TTG
Gln
>WENV170442123
CEUW01012512
263627
Bacteroidota
TTG
Gln
>WENV170442517
CEUW01045774
138908
Bacteroidota
TGG
Pro
>WENV170443177
CEUW01098439
68984
Bacteroidota
CAA
Leu
>WENV170442120
CEUW01011846
144149
Bacteroidota
TGG
Pro
>WENV170443117
CEUW01096657
321470
Bacteroidota
GAA
Phe
>WENV170443166
CEUW01098253
63136
Bacteroidota
TGA
Ser
>WENV170442500
CEUW01044538
263886
Bacteroidota
TTG
Gln
>WENV170442849
CEUW01077228
188637
Bacteroidota
GTT
Asn
>WENV170442224
CEUW01019448
152195
Bacteroidota
TAC
Val
>WENV170441977
CEUW01001137
310118
Bacteroidota
CCA
Trp
>WENV170442038
CEUW01005557
310118
Bacteroidota
CCA
Trp
>WENV170442390
CEUW01033517
310118
Bacteroidota
CCA
Trp
>WENV170442637
CEUW01054538
23145
Bacteroidota
GGA
Ser
>WENV170443654
CEUW01252292
472124
Bacteroidota
GCA
Cys
>WENV170442394
CEUW01033723
311172
Bacteroidota
GAA
Phe
>WENV170441969
CEUW01000589
301008
Bacteroidota
TTG
Gln
>WENV170443299
CEUW01135337
68352
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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