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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170476460
CEVI01113539
158433
Gammaproteobacteria
ACG
Arg
>WENV170475663
CEVI01021810
448974
Gammaproteobacteria
GCA
Cys
>WENV170475743
CEVI01028265
256881
Gammaproteobacteria
GTG
His
>WENV170476010
CEVI01059989
18367
Gammaproteobacteria
GCT
Ser
>WENV170476198
CEVI01082016
18505
Gammaproteobacteria
TGA
Ser
>WENV170475594
CEVI01015652
49679
Gammaproteobacteria
GGA
Ser
>WENV170476315
CEVI01095389
261853
Gammaproteobacteria
GTT
Asn
>WENV170476532
CEVI01120273
263230
Gammaproteobacteria
TTT
Lys
>WENV170475706
CEVI01026531
212762
Gammaproteobacteria
TGG
Pro
>WENV170475707
CEVI01026531
231036
Gammaproteobacteria
TCT
Arg
>WENV170476309
CEVI01094803
275093
Gammaproteobacteria
GGT
Thr
>WENV170476376
CEVI01105026
160668
Gammaproteobacteria
CAT
Met
>WENV170475484
CEVI01004418
305458
Gammaproteobacteria
TAC
Val
>WENV170475705
CEVI01026360
221435
Gammaproteobacteria
GGG
Pro
>WENV170476055
CEVI01065279
65736
Gammaproteobacteria
TAA
Leu
>WENV170475625
CEVI01018106
160858
Gammaproteobacteria
CCA
Trp
>WENV170475697
CEVI01025302
21308
Gammaproteobacteria
GGA
Ser
>WENV170476543
CEVI01121780
260947
Gammaproteobacteria
TTG
Gln
>WENV170475864
CEVI01043110
160117
Gammaproteobacteria
ACG
Arg
>WENV170476199
CEVI01082337
229608
Gammaproteobacteria
CAT
Met
>WENV170475644
CEVI01019771
107345
Gammaproteobacteria
GAG
Leu
>WENV170475863
CEVI01043110
9771
Gammaproteobacteria
GCT
Ser
>WENV170476425
CEVI01109124
158349
Gammaproteobacteria
>WENV170475564
CEVI01012591
285013
Gammaproteobacteria
GGT
Thr
>WENV170475687
CEVI01024339
172986
Gammaproteobacteria
CCA
Trp
>WENV170476230
CEVI01087657
172986
Gammaproteobacteria
CCA
Trp
>WENV170476791
CEVI01212227
68919
Gammaproteobacteria
CAG
Leu
>WENV170475683
CEVI01023942
257697
Gammaproteobacteria
GTG
His
>WENV170475785
CEVI01033052
448070
Gammaproteobacteria
GCA
Cys
>WENV170476291
CEVI01094192
174958
Gammaproteobacteria
TGG
Pro
>WENV170475843
CEVI01040436
181298
Gammaproteobacteria
>WENV170475856
CEVI01041915
181298
Gammaproteobacteria
>WENV170475744
CEVI01028265
106574
Gammaproteobacteria
TAG
Leu
>WENV170476307
CEVI01094803
128911
Gammaproteobacteria
GTA
Tyr
>WENV170475907
CEVI01048997
263347
Gammaproteobacteria
TTT
Lys
>WENV170476833
CEVI01220844
189269
Gammaproteobacteria
CGG
Pro
>WENV170476564
CEVI01122925
258908
Gammaproteobacteria
CCT
Arg
>WENV170476011
CEVI01059989
214281
Gammaproteobacteria
ACG
Arg
>WENV170476012
CEVI01059989
214281
Gammaproteobacteria
ACG
Arg
>WENV170476774
CEVI01209185
306475
Gammaproteobacteria
GTG
His
>WENV170476286
CEVI01094025
160118
Gammaproteobacteria
GTT
Asn
>WENV170476433
CEVI01110249
50028
Gammaproteobacteria
GGA
Ser
>WENV170475661
CEVI01021792
290512
Gammaproteobacteria
TGT
Thr
>WENV170476418
CEVI01108507
290512
Gammaproteobacteria
TGT
Thr
>WENV170475734
CEVI01027788
26256
Gammaproteobacteria
CGA
Ser
>WENV170475515
CEVI01007086
261154
Gammaproteobacteria
TGC
Ala
>WENV170476852
CEVI01225596
479393
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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