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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170477669
CEVJ01094040
340312
Alphaproteobacteria
TTG
Gln
>WENV170477193
CEVJ01044753
381459
Alphaproteobacteria
CAC
Val
>WENV170477100
CEVJ01032629
365250
Alphaproteobacteria
GCC
Gly
>WENV170477187
CEVJ01043898
313418
Alphaproteobacteria
GGC
Ala
>WENV170477359
CEVJ01063801
59361
Alphaproteobacteria
GAG
Leu
>WENV170477616
CEVJ01090964
10665
Alphaproteobacteria
GCT
Ser
>WENV170477905
CEVJ01177100
159305
Alphaproteobacteria
GTC
Asp
>WENV170477910
CEVJ01179935
23468
Alphaproteobacteria
GCT
Ser
>WENV170477824
CEVJ01145938
339724
Alphaproteobacteria
TTG
Gln
>WENV170477498
CEVJ01080735
23671
Alphaproteobacteria
CGA
Ser
>WENV170477643
CEVJ01092354
338282
Alphaproteobacteria
GTT
Asn
>WENV170477438
CEVJ01073927
147577
Alphaproteobacteria
CCG
Arg
>WENV170477640
CEVJ01092157
95928
Alphaproteobacteria
TAG
Leu
>WENV170477456
CEVJ01075508
162801
Alphaproteobacteria
GTG
His
>WENV170477391
CEVJ01067904
200119
Alphaproteobacteria
CAT
Met
>WENV170477397
CEVJ01068993
307050
Alphaproteobacteria
GGC
Ala
>WENV170477755
CEVJ01120700
157999
Alphaproteobacteria
TCT
Arg
>WENV170477765
CEVJ01125447
338289
Alphaproteobacteria
GAC
Val
>WENV170477233
CEVJ01049318
193197
Alphaproteobacteria
ACG
Arg
>WENV170477356
CEVJ01063273
417107
Alphaproteobacteria
GCA
Cys
>WENV170477590
CEVJ01087989
339750
Alphaproteobacteria
GGT
Thr
>WENV170477173
CEVJ01042690
167926
Alphaproteobacteria
CAT
Met
>WENV170477204
CEVJ01045862
130084
Alphaproteobacteria
GGG
Pro
>WENV170476973
CEVJ01014039
59164
Alphaproteobacteria
GAG
Leu
>WENV170477057
CEVJ01026254
284043
Alphaproteobacteria
CGT
Thr
>WENV170477064
CEVJ01027620
338760
Alphaproteobacteria
GAA
Phe
>WENV170477518
CEVJ01081163
237196
Alphaproteobacteria
CGT
Thr
>WENV170477788
CEVJ01135129
145689
Alphaproteobacteria
CCT
Arg
>WENV170477526
CEVJ01082135
23717
Alphaproteobacteria
TGA
Ser
>WENV170477980
CEVJ01195290
266073
Alphaproteobacteria
TTT
Lys
>WENV170477879
CEVJ01168260
338287
Alphaproteobacteria
GGT
Thr
>WENV170477623
CEVJ01091385
254524
Alphaproteobacteria
TAC
Val
>WENV170477869
CEVJ01165520
23743
Alphaproteobacteria
GCT
Ser
>WENV170477564
CEVJ01085479
147289
Alphaproteobacteria
GTC
Asp
>WENV170476902
CEVJ01002909
21074
Alphaproteobacteria
GGA
Ser
>WENV170477439
CEVJ01074057
114040
Alphaproteobacteria
CAA
Leu
>WENV170477618
CEVJ01091031
377327
Alphaproteobacteria
GCC
Gly
>WENV170477988
CEVJ01196855
191695
Alphaproteobacteria
CCT
Arg
>WENV170477799
CEVJ01138403
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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