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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170507970
CEVX01113609
139500
Bacteroidota
TGG
Pro
>WENV170508507
CEVX01169634
300555
Bacteroidota
CCA
Trp
>WENV170508769
CEVX01252240
184180
Bacteroidota
GTC
Asp
>WENV170507874
CEVX01102833
139505
Bacteroidota
TAC
Val
>WENV170507724
CEVX01081606
449969
Bacteroidota
GCA
Cys
>WENV170508538
CEVX01171798
139484
Bacteroidota
TAC
Val
>WENV170508089
CEVX01124178
149891
Bacteroidota
TGG
Pro
>WENV170507950
CEVX01110702
161475
Bacteroidota
TCG
Arg
>WENV170507364
CEVX01043506
57357
Bacteroidota
TGA
Ser
>WENV170507130
CEVX01019591
56450
Bacteroidota
TGA
Ser
>WENV170507623
CEVX01069390
448855
Bacteroidota
GCA
Cys
>WENV170506904
CEVX01001045
263627
Bacteroidota
TTG
Gln
>WENV170507056
CEVX01013890
263627
Bacteroidota
TTG
Gln
>WENV170507902
CEVX01105166
263627
Bacteroidota
TTG
Gln
>WENV170508425
CEVX01164393
263627
Bacteroidota
TTG
Gln
>WENV170507690
CEVX01078153
49783
Bacteroidota
TGA
Ser
>WENV170507011
CEVX01010769
177164
Bacteroidota
GTC
Asp
>WENV170508288
CEVX01149011
177164
Bacteroidota
GTC
Asp
>WENV170508587
CEVX01172994
177164
Bacteroidota
GTC
Asp
>WENV170508560
CEVX01172408
138967
Bacteroidota
TGG
Pro
>WENV170507235
CEVX01029132
188048
Bacteroidota
GGC
Ala
>WENV170507308
CEVX01035452
188048
Bacteroidota
GGC
Ala
>WENV170507423
CEVX01048457
188048
Bacteroidota
GGC
Ala
>WENV170508275
CEVX01147886
188048
Bacteroidota
GGC
Ala
>WENV170507249
CEVX01030502
209332
Bacteroidota
TCG
Arg
>WENV170507225
CEVX01027864
257687
Bacteroidota
TTT
Lys
>WENV170507247
CEVX01030169
165187
Bacteroidota
GGG
Pro
>WENV170508307
CEVX01151156
321470
Bacteroidota
GAA
Phe
>WENV170508933
CEVX01307956
50353
Bacteroidota
TGA
Ser
>WENV170506988
CEVX01008906
168483
Bacteroidota
GTT
Asn
>WENV170507283
CEVX01033419
263886
Bacteroidota
TTG
Gln
>WENV170507196
CEVX01025015
304848
Bacteroidota
GCC
Gly
>WENV170507798
CEVX01092390
310118
Bacteroidota
CCA
Trp
>WENV170508722
CEVX01224587
66584
Bacteroidota
GCT
Ser
>WENV170506909
CEVX01001408
325477
Bacteroidota
TTG
Gln
>WENV170508373
CEVX01158604
325477
Bacteroidota
TTG
Gln
>WENV170508475
CEVX01167608
325477
Bacteroidota
TTG
Gln
>WENV170508002
CEVX01117256
301008
Bacteroidota
TTG
Gln
>WENV170508087
CEVX01124125
301008
Bacteroidota
TTG
Gln
>WENV170507274
CEVX01032581
139231
Bacteroidota
GAC
Val
>WENV170507769
CEVX01088294
139231
Bacteroidota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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