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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170530832
CEWK01063057
339454
Alphaproteobacteria
>WENV170530847
CEWK01064533
149985
Alphaproteobacteria
ACG
Arg
>WENV170530364
CEWK01015064
147089
Alphaproteobacteria
ACG
Arg
>WENV170531178
CEWK01105443
246184
Alphaproteobacteria
GAA
Phe
>WENV170531424
CEWK01130240
348781
Alphaproteobacteria
GAA
Phe
>WENV170531289
CEWK01118889
348781
Alphaproteobacteria
GAA
Phe
>WENV170530519
CEWK01027693
348781
Alphaproteobacteria
GAA
Phe
>WENV170530687
CEWK01045060
345376
Alphaproteobacteria
GAC
Val
>WENV170530950
CEWK01077705
59164
Alphaproteobacteria
GAG
Leu
>WENV170531081
CEWK01091457
160158
Alphaproteobacteria
GAT
Ile
>WENV170531076
CEWK01091133
349303
Alphaproteobacteria
GCC
Gly
>WENV170530620
CEWK01037121
23468
Alphaproteobacteria
GCT
Ser
>WENV170531354
CEWK01125250
147083
Alphaproteobacteria
GGG
Pro
>WENV170530637
CEWK01039548
147083
Alphaproteobacteria
GGG
Pro
>WENV170530595
CEWK01034696
339290
Alphaproteobacteria
GGT
Thr
>WENV170530864
CEWK01067004
339750
Alphaproteobacteria
GGT
Thr
>WENV170531020
CEWK01085841
345454
Alphaproteobacteria
GGT
Thr
>WENV170530814
CEWK01061324
159395
Alphaproteobacteria
GTC
Asp
>WENV170531417
CEWK01129935
161002
Alphaproteobacteria
GTG
His
>WENV170531363
CEWK01125617
338282
Alphaproteobacteria
GTT
Asn
>WENV170530656
CEWK01041218
242540
Alphaproteobacteria
TGC
Ala
>WENV170530307
CEWK01010381
144964
Alphaproteobacteria
TGG
Pro
>WENV170531156
CEWK01101989
237740
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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