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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549018
CXUU01000002
145345
Actinomycetota
TAC
Val
>WENV170549019
CXUU01000006
45852
Actinomycetota
CGA
Ser
>WENV170549020
CXUU01000006
45154
Actinomycetota
TGA
Ser
>WENV170549021
CXUU01000012
95593
Actinomycetota
>WENV170549022
CXUU01000012
144700
Actinomycetota
CAT
Met
>WENV170549023
CXUU01000012
23370
Actinomycetota
GCT
Ser
>WENV170549025
CXUU01000015
201717
Actinomycetota
CTT
Lys
>WENV170549027
CXUU01000021
235194
Actinomycetota
GTG
His
>WENV170549030
CXUU01000024
356045
Actinomycetota
GAC
Val
>WENV170549031
CXUU01000024
235199
Actinomycetota
CAC
Val
>WENV170549033
CXUU01000024
144826
Actinomycetota
GGG
Pro
>WENV170549034
CXUU01000027
235348
Actinomycetota
CCT
Arg
>WENV170549035
CXUU01000032
16222
Actinomycetota
GAG
Leu
>WENV170549037
CXUU01000036
338239
Actinomycetota
TTC
Glu
>WENV170549038
CXUU01000037
158720
Actinomycetota
ACG
Arg
>WENV170549039
CXUU01000037
158720
Actinomycetota
ACG
Arg
>WENV170549043
CXUU01000065
356045
Actinomycetota
GAC
Val
>WENV170549044
CXUU01000065
235199
Actinomycetota
CAC
Val
>WENV170549045
CXUU01000074
254857
Actinomycetota
CCG
Arg
>WENV170549047
CXUU01000078
144825
Actinomycetota
CAT
Met
>WENV170549048
CXUU01000079
243162
Actinomycetota
GTT
Asn
>WENV170549049
CXUU01000079
235148
Actinomycetota
GTT
Asn
>WENV170549050
CXUU01000080
413665
Actinomycetota
TTG
Gln
>WENV170549051
CXUU01000083
174149
Actinomycetota
GAT
Ile
>WENV170549052
CXUU01000083
235174
Actinomycetota
TGC
Ala
>WENV170549053
CXUU01000095
144600
Actinomycetota
TGG
Pro
>WENV170549054
CXUU01000095
144595
Actinomycetota
CAA
Leu
>WENV170549055
CXUU01000096
235347
Actinomycetota
GGC
Ala
>WENV170549056
CXUU01000096
235347
Actinomycetota
GGC
Ala
>WENV170549057
CXUU01000111
295695
Actinomycetota
CTC
Glu
>WENV170549058
CXUU01000111
367535
Actinomycetota
CTG
Gln
>WENV170549059
CXUU01000111
53078
Actinomycetota
GGA
Ser
>WENV170549060
CXUU01000112
273786
Actinomycetota
CGT
Thr
>WENV170549061
CXUU01000112
113601
Actinomycetota
TAG
Leu
>WENV170549062
CXUU01000113
144823
Actinomycetota
TCT
Arg
>WENV170549063
CXUU01000124
431657
Actinomycetota
CCC
Gly
>WENV170549064
CXUU01000130
119508
Actinomycetota
TAA
Leu
>WENV170549065
CXUU01000136
235101
Actinomycetota
TTT
Lys
>WENV170549066
CXUU01000148
80622
Actinomycetota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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