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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170552369
CXWJ01058842
162089
Alphaproteobacteria
TGG
Pro
>WENV170552030
CXWJ01035268
144964
Alphaproteobacteria
TGG
Pro
>WENV170552269
CXWJ01051469
339325
Alphaproteobacteria
CAC
Val
>WENV170551700
CXWJ01018178
81091
Alphaproteobacteria
GTA
Tyr
>WENV170551572
CXWJ01012955
199776
Alphaproteobacteria
CGG
Pro
>WENV170551264
CXWJ01002564
340956
Alphaproteobacteria
TTG
Gln
>WENV170552024
CXWJ01035145
338496
Alphaproteobacteria
CAT
Met
>WENV170551417
CXWJ01006977
339490
Alphaproteobacteria
GAC
Val
>WENV170551095
CXWJ01000117
95923
Alphaproteobacteria
TAG
Leu
>WENV170551387
CXWJ01006314
339495
Alphaproteobacteria
>WENV170552273
CXWJ01051710
193197
Alphaproteobacteria
ACG
Arg
>WENV170551391
CXWJ01006387
338268
Alphaproteobacteria
GAC
Val
>WENV170551769
CXWJ01022505
130084
Alphaproteobacteria
GGG
Pro
>WENV170552177
CXWJ01042905
159476
Alphaproteobacteria
ACG
Arg
>WENV170552218
CXWJ01047669
284043
Alphaproteobacteria
CGT
Thr
>WENV170551573
CXWJ01012961
237479
Alphaproteobacteria
TTT
Lys
>WENV170552117
CXWJ01040009
352191
Alphaproteobacteria
GGT
Thr
>WENV170552329
CXWJ01056110
266073
Alphaproteobacteria
TTT
Lys
>WENV170551602
CXWJ01014543
95925
Alphaproteobacteria
CAA
Leu
>WENV170551604
CXWJ01014602
236045
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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