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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180005621
FLRW01147919
451778
Bacillota
TCC
Gly
>WENV180005189
FLRW01000098
324257
Bacillota
CCA
Trp
>WENV180005465
FLRW01048703
449468
Bacillota
CCA
Trp
>WENV180005405
FLRW01019305
160420
Bacillota
CAT
Met
>WENV180005453
FLRW01041527
160420
Bacillota
CAT
Met
>WENV180005745
FLRW01308842
370121
Bacillota
>WENV180005506
FLRW01076042
18453
Bacillota
GGA
Ser
>WENV180005580
FLRW01112640
18453
Bacillota
GGA
Ser
>WENV180005607
FLRW01132691
452212
Bacillota
GGT
Thr
>WENV180005404
FLRW01019305
259279
Bacillota
GGT
Thr
>WENV180005452
FLRW01041527
259279
Bacillota
GGT
Thr
>WENV180005329
FLRW01004166
160630
Bacillota
CCT
Arg
>WENV180005434
FLRW01033961
160630
Bacillota
CCT
Arg
>WENV180005625
FLRW01149662
370120
Bacillota
CCG
Arg
>WENV180005323
FLRW01003596
126056
Bacillota
GTA
Tyr
>WENV180005527
FLRW01081015
266302
Bacillota
GTC
Asp
>WENV180005427
FLRW01028057
18454
Bacillota
GCT
Ser
>WENV180005529
FLRW01081015
320507
Bacillota
TGT
Thr
>WENV180005606
FLRW01132407
293077
Bacillota
TTT
Lys
>WENV180005319
FLRW01003223
160422
Bacillota
TCT
Arg
>WENV180005518
FLRW01081015
371923
Bacillota
>WENV180005774
FLRW01323224
124699
Bacillota
CAA
Leu
>WENV180005479
FLRW01058718
261775
Bacillota
GAA
Phe
>WENV180005528
FLRW01081015
261775
Bacillota
GAA
Phe
>WENV180005626
FLRW01157539
375998
Bacillota
CCT
Arg
>WENV180005499
FLRW01073009
380507
Bacillota
CCT
Arg
>WENV180005338
FLRW01004697
41754
Bacillota
TAA
Leu
>WENV180005191
FLRW01000098
105465
Bacillota
TAG
Leu
>WENV180005482
FLRW01060415
105465
Bacillota
TAG
Leu
>WENV180005203
FLRW01000357
259275
Bacillota
CTT
Lys
>WENV180005519
FLRW01081015
65656
Bacillota
TAA
Leu
>WENV180005526
FLRW01081015
163269
Bacillota
>WENV180005623
FLRW01148488
270080
Bacillota
GTG
His
>WENV180005767
FLRW01322208
18455
Bacillota
CGA
Ser
>WENV180005488
FLRW01064889
88873
Bacillota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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