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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180006630
FLRY01162556
258903
Bacteroidota
>WENV180006758
FLRY01283065
413952
Bacteroidota
>WENV180006331
FLRY01010200
155123
Bacteroidota
GTT
Asn
>WENV180006381
FLRY01022819
155123
Bacteroidota
GTT
Asn
>WENV180006396
FLRY01030011
37794
Bacteroidota
TAA
Leu
>WENV180006525
FLRY01102857
244295
Bacteroidota
CCA
Trp
>WENV180006735
FLRY01263533
60822
Bacteroidota
GAG
Leu
>WENV180006383
FLRY01023605
388940
Bacteroidota
CCT
Arg
>WENV180006660
FLRY01195707
171336
Bacteroidota
GGC
Ala
>WENV180006436
FLRY01050090
81773
Bacteroidota
CAG
Leu
>WENV180006767
FLRY01289798
148247
Bacteroidota
TGC
Ala
>WENV180006554
FLRY01120586
144639
Bacteroidota
GGC
Ala
>WENV180006513
FLRY01094336
240012
Bacteroidota
CCC
Gly
>WENV180006424
FLRY01047181
167013
Bacteroidota
TGG
Pro
>WENV180006619
FLRY01154989
95954
Bacteroidota
TAG
Leu
>WENV180006632
FLRY01162762
127951
Bacteroidota
TAC
Val
>WENV180006631
FLRY01162762
127951
Bacteroidota
TAC
Val
>WENV180006635
FLRY01164730
60484
Bacteroidota
CAA
Leu
>WENV180006416
FLRY01039625
413953
Bacteroidota
GCA
Cys
>WENV180006740
FLRY01265950
414472
Bacteroidota
TTG
Gln
>WENV180006564
FLRY01127252
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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